C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: grancalcin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026893 Gca 10090 + 2:62664285-62694109 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028257 Gca-001 62664285-62694109 protein_coding
  ENSMUST00000148083 Gca-002 62686198-62690431 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028257ENSMUST00000148083
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028257 2.023±0.33 3.696±0.77 0.937±0.32 2.725±0.09 2.711±0.87 3.677±1.07 3.642±1.54 4.333±1.07 2.842±1.83 3.581±0.56 0.581±0.07 3.422±1.70 3.635±0.66 5.524±2.79
ENSMUST00000148083 5.787±0.00 3.766±0.00 N/A N/A 6.851±0.17 11.681±0.00 N/A 8.114±0.52 3.773±0.00 N/A N/A 5.504±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KY CIL_0005KY_0002 CGP 2:62595798-62694109
CIL_0005KR CIL_0005KR_0002 CGP 2:62664285-63184287

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004198 IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005509 ISS calcium ion binding
GO:0005737 IBA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0006508 IBA proteolysis
GO:0042803 IEA protein homodimerization activity
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020187 GCA grancalcin, EF-hand calcium binding protein protein_coding Danio_rerio
ENSG00000115271 GCA grancalcin, EF-hand calcium binding protein protein_coding Homo_sapiens

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