C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein cytoplasmic 1 intermediate chain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112138 Dync1i2-005 ENSMUSG00000027012 10090 + 2:71211758-71263291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112138
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112138 18.065±2.78 5.086±1.36 18.920±2.46 10.414±3.07 8.486±2.17 10.123±0.43 13.642±2.87 10.197±2.23 17.127±2.44 6.634±1.22 15.416±14.60 24.464±4.35 23.147±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PU CIL_0002PU_0002 CGP 2:71117923-71263303
CIL_0007RB CIL_0007RB_0003 VISTA 2:71118479-71722071
CIL_0008A7 CIL_0008A7_0002 VISTA 2:71118555-71719483
CIL_00062P CIL_00062P_0003 CGP 2:71211706-71367749

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005868 IEA cytoplasmic dynein complex
GO:0006810 IEA transport
GO:0007018 IEA microtubule-based movement
GO:0008152 IEA metabolic process
GO:0031982 ISS vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340296 DYNC1I2-002 protein_coding Homo_sapiens 0 2815
ENST00000397119 DYNC1I2-001 protein_coding Homo_sapiens 0 2374
ENST00000409197 DYNC1I2-006 protein_coding Homo_sapiens 0 2806
ENST00000409317 DYNC1I2-005 protein_coding Homo_sapiens 0 2183
ENST00000409453 DYNC1I2-027 protein_coding Homo_sapiens 0 2353
ENST00000409773 DYNC1I2-004 protein_coding Homo_sapiens 0 2374
ENST00000410079 DYNC1I2-003 protein_coding Homo_sapiens 0 2316
ENST00000411953 DYNC1I2-020 protein_coding Homo_sapiens 2e-32 143
ENST00000412370 DYNC1I2-015 protein_coding Homo_sapiens 0 202
ENST00000422646 DYNC1I2-019 protein_coding Homo_sapiens 0 435
ENST00000423910 DYNC1I2-016 protein_coding Homo_sapiens 0 318
ENST00000425485 DYNC1I2-018 protein_coding Homo_sapiens 0 713
ENST00000430778 DYNC1I2-017 protein_coding Homo_sapiens 0 435
ENST00000435234 DYNC1I2-013 protein_coding Homo_sapiens 0 1221
ENST00000435916 DYNC1I2P1-001 processed_pseudogene Homo_sapiens 0 2475
ENST00000438879 DYNC1I2-011 protein_coding Homo_sapiens 0 250
ENST00000443458 DYNC1I2-014 protein_coding Homo_sapiens 0 355
ENST00000445378 DYNC1I2-022 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000452242 DYNC1I2-021 protein_coding Homo_sapiens 0 484
ENST00000456808 DYNC1I2-012 protein_coding Homo_sapiens 0 375
ENST00000470286 DYNC1I2-024 retained_intron Homo_sapiens 0 399
ENST00000476551 DYNC1I2-025 retained_intron Homo_sapiens 0.00000000008 71
ENST00000479806 DYNC1I2-009 retained_intron Homo_sapiens 0 1760
ENST00000482454 DYNC1I2-007 retained_intron Homo_sapiens 0 2374
ENST00000508530 DYNC1I2-026 protein_coding Homo_sapiens 0 2795

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