C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone aminotransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027018 Hat1 10090 + 2:71388958-71441622 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028408 Hat1-201 71389260-71441622 protein_coding
  ENSMUST00000112122 Hat1-001 71388958-71441622 protein_coding
  ENSMUST00000144888 Hat1-003 71408988-71411950 processed_transcript
  ENSMUST00000145147 Hat1-002 71420092-71438812 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028408ENSMUST00000112122ENSMUST00000144888
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028408 4.355±1.74 1.270±0.23 10.625±1.83 12.733±7.09 3.084±0.63 1.260±0.33 5.074±0.36 4.368±0.75 30.607±34.32 3.235±0.42 6.705±0.34 6.085±6.51 50.479±20.85 9.536±3.72
ENSMUST00000112122 N/A N/A N/A N/A 0.220±0.00 0.206±0.05 0.762±0.00 N/A N/A N/A N/A 0.556±0.15 N/A 2.679±0.62
ENSMUST00000144888 N/A 2.589±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RB CIL_0007RB_0003 VISTA 2:71118479-71722071
CIL_0008A7 CIL_0008A7_0002 VISTA 2:71118555-71719483
CIL_0008C9 CIL_0008C9_0002 VISTA 2:71216484-71818219
CIL_0009AY CIL_0009AY_0002 VISTA 2:71227336-71828847
CIL_0008AZ CIL_0008AZ_0002 VISTA 2:71235378-71836557
CIL_0008B0 CIL_0008B0_0002 VISTA 2:71237156-71838581
CIL_0007JJ CIL_0007JJ_002C UCNEbase 2:71244754-71538420
CIL_0004K0 CIL_0004K0_0002 CGP 2:71271063-71441622
CIL_0004K4 CIL_0004K4_0002 CGP 2:71388958-71525194

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IEA nuclear chromatin
GO:0004402 IEA histone acetyltransferase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006335 IEA DNA replication-dependent nucleosome assembly
GO:0006336 IEA DNA replication-independent nucleosome assembly
GO:0006348 IEA chromatin silencing at telomere
GO:0007584 IEA response to nutrient
GO:0010485 ISS H4 histone acetyltransferase activity
GO:0016573 IEA histone acetylation
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043234 IEA protein complex
GO:0043967 ISS histone H4 acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034916 hat1 histone acetyltransferase 1 protein_coding Danio_rerio
ENSG00000128708 HAT1 histone acetyltransferase 1 protein_coding Homo_sapiens

Loading