C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone acetyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128708 HAT1 9606 + 2:171922448-171983682 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264108 HAT1-001 171922465-171983682 protein_coding
  ENST00000392584 HAT1-006 171964833-171980855 retained_intron
  ENST00000412731 HAT1-002 171922448-171983682 nonsense_mediated_decay
  ENST00000457761 HAT1-003 171922462-171979995 nonsense_mediated_decay
  ENST00000460481 HAT1-005 171922462-171923475 processed_transcript
  ENST00000494601 HAT1-004 171922607-171983623 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264108ENST00000412731ENST00000494601
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264108 9.312±0.00 13.684±0.00 2.513±0.00 7.947±2.63 10.170±1.04 9.548±1.39 6.779±2.84 9.215±4.72 5.852±0.94 8.334±3.48 8.182±7.31 17.178±2.74 8.848±2.14 13.261±5.68
ENST00000412731 2.893±0.00 N/A 1.583±0.00 3.326±0.00 N/A N/A 0.872±0.00 1.509±0.00 N/A 3.570±0.00 2.326±0.00 15.215±13.36 12.203±0.00 6.393±0.00
ENST00000494601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.647±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RB CIL_0007RB_0001 VISTA 2:171663732-172264836
CIL_0008A7 CIL_0008A7_0001 VISTA 2:171663843-172264792
CIL_0007RB CIL_0007RB_0002 VISTA 2:171664837-172267307
CIL_00062P CIL_00062P_0002 CGP 2:171687409-171999859
CIL_0007JJ CIL_0007JJ_0001 UCNEbase 2:171723627-171935515
CIL_0008C9 CIL_0008C9_0001 VISTA 2:171771791-172373521
CIL_0009AY CIL_0009AY_0001 VISTA 2:171783051-172384518
CIL_0004K0 CIL_0004K0_0001 CGP 2:171784370-171999859
CIL_0008AZ CIL_0008AZ_0001 VISTA 2:171791151-172392324
CIL_0008B0 CIL_0008B0_0001 VISTA 2:171792917-172394318
CIL_0004K4 CIL_0004K4_0001 CGP 2:171922448-172082430

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0004402 TAS:IEA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0006323 TAS DNA packaging
GO:0006325 TAS chromatin organization
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006348 IEA chromatin silencing at telomere
GO:0006475 TAS internal protein amino acid acetylation
GO:0007584 IEA response to nutrient
GO:0010485 IDA H4 histone acetyltransferase activity
GO:0016568 IEA chromatin modification
GO:0016573 IEA histone acetylation
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043234 IDA protein complex
GO:0043967 IDA histone H4 acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034916 hat1 histone acetyltransferase 1 protein_coding Danio_rerio
ENSMUSG00000027018 Hat1 histone aminotransferase 1 protein_coding Mus_musculus

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