C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peptidase domain containing associated with muscle regeneration 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027188 Pamr1 10090 + 2:102550012-102643041 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028612 Pamr1-001 102550012-102643041 protein_coding
  ENSMUST00000139090 Pamr1-003 102550070-102558026 processed_transcript
  ENSMUST00000143071 Pamr1-004 102636025-102640787 retained_intron
  ENSMUST00000144333 Pamr1-002 102550149-102635648 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028612ENSMUST00000144333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028612 14.856±5.86 0.630±0.10 26.815±2.34 1.645±0.98 13.794±2.40 8.429±1.78 1.670±0.18 2.472±0.19 1.541±0.71 6.702±1.50 0.613±0.26 8.054±1.89 1.615±1.17 0.387±0.20
ENSMUST00000144333 N/A N/A N/A 1.038±0.78 N/A N/A N/A N/A N/A N/A 0.251±0.07 1.543±0.00 0.061±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZW CIL_0008ZW_0002 VISTA 2:102019035-102620194

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005576 IEA extracellular region
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093480 PAMR1 peptidase domain containing associated with muscle regeneration 1 protein_coding Danio_rerio
ENSG00000149090 PAMR1 peptidase domain containing associated with muscle regeneration 1 protein_coding Homo_sapiens

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