C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sperm flagellar 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027329 Spef1 10090 - 2:131170261-131187282 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028801 Spef1-001 131170261-131187282 protein_coding
  ENSMUST00000110218 Spef1-002 131170316-131175201 protein_coding
  ENSMUST00000127987 Spef1-003 131171611-131174653 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENSMUST00000028801ENSMUST00000110218
Transcript ID Brain Ovary Testis
ENSMUST00000028801 N/A N/A 4.942±0.11
ENSMUST00000110218 15.370±0.00 7.806±0.25 13.538±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033D CIL_00033D_0002 CGP 2:131146324-131187282
CIL_00033B CIL_00033B_0002 CGP 2:131170261-131187282

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005930 ISS axoneme
GO:0008150 ND biological_process
GO:0031514 IDA motile cilium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000101222 SPEF1 sperm flagellar 1 protein_coding Homo_sapiens

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