C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sperm flagellar 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101222 SPEF1 9606 - 20:3777504-3781448 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000379756 SPEF1-003 3777504-3781448 protein_coding
  ENST00000463490 SPEF1-002 3777504-3781448 processed_transcript
  ENST00000471499 SPEF1-001 3777504-3781448 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLungOvaryTestisENST00000379756ENST00000463490ENST00000471499
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000379756 N/A 0.607±0.00 3.973±0.87 0.127±0.00 0.135±0.00 0.023±0.00 0.528±0.07 1.897±1.19 2.379±2.17 10.251±3.41
ENST00000463490 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A 0.247±0.12 N/A
ENST00000471499 N/A N/A N/A N/A N/A N/A 0.168±0.00 1.264±0.00 0.146±0.03 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033D CIL_00033D_0001 CGP 20:3753508-3781448
CIL_00033B CIL_00033B_0001 CGP 20:3777504-3786690

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005930 ISS axoneme
GO:0008150 ND biological_process
GO:0031514 IEA motile cilium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022007 SPEF1 sperm flagellar 1 protein_coding Danio_rerio
ENSMUSG00000027329 Spef1 sperm flagellar 1 protein_coding Mus_musculus

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