C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00033B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101222-ENSG00000125817 CGP 9606 20:3777504-3786690
GeneTranscriptPositionBiotype
ENSG00000101222 (SPEF1)
sperm flagellar 1 		ENST00000379756 (SPEF1-003) 3777504-3781448 protein_coding
ENST00000463490 (SPEF1-002) 3777504-3781448 processed_transcript
ENST00000471499 (SPEF1-001) 3777504-3781448 processed_transcript
ENSG00000125817 (CENPB)
centromere protein B, 80kDa 		ENST00000379751 (CENPB-001) 3783851-3786690 protein_coding
CIL_00033B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027329-ENSMUSG00000027329 CGP 10090 2:131170261-131187282
GeneTranscriptPositionBiotype
ENSMUSG00000027329 (Spef1)
sperm flagellar 1 		ENSMUST00000028801 (Spef1-001) 131170261-131187282 protein_coding
ENSMUST00000110218 (Spef1-002) 131170316-131175201 protein_coding
ENSMUST00000127987 (Spef1-003) 131171611-131174653 protein_coding
ENSMUSG00000027330 (Cdc25b)
cell division cycle 25B 		ENSMUST00000028804 (Cdc25b-001) 131186949-131198495 protein_coding
ENSMUST00000079857 (Cdc25b-002) 131186958-131198497 protein_coding
ENSMUST00000125423 (Cdc25b-003) 131188158-131191918 retained_intron
ENSMUST00000132727 (Cdc25b-007) 131191350-131192102 retained_intron
ENSMUST00000138669 (Cdc25b-006) 131191813-131193279 retained_intron
ENSMUST00000141732 (Cdc25b-004) 131191743-131193392 retained_intron
ENSMUST00000145556 (Cdc25b-005) 131192874-131194406 retained_intron
ENSMUSG00000068267 (Cenpb)
centromere protein B 		ENSMUST00000089510 (Cenpb-001) 131175182-131180067 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033B_0001ENSG00000101222ENST00000379756ENST00000463490ENST00000471499ENSG00000125817ENST00000379751CIL_00033B_0002ENSMUSG00000027329ENSMUST00000028801ENSMUST00000110218ENSMUST00000127987ENSMUSG00000027330ENSMUST00000028804ENSMUST00000079857ENSMUST00000125423ENSMUST00000132727ENSMUST00000138669ENSMUST00000141732ENSMUST00000145556ENSMUSG00000068267ENSMUST00000089510
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033B_0001ENSG00000101222ENST00000379756ENST00000463490ENST00000471499ENSG00000125817ENST00000379751CIL_00033B_0002ENSMUSG00000027329ENSMUST00000028801ENSMUST00000110218ENSMUSG00000027330ENSMUST00000028804ENSMUST00000079857ENSMUSG00000068267ENSMUST00000089510
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101222 ENST00000379756 N/A N/A 0.607±0.00 3.973±0.87 0.127±0.00 0.135±0.00 0.023±0.00 0.528±0.07 N/A 1.897±1.19 N/A 2.379±2.17 N/A 10.251±3.41
ENST00000463490 N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.247±0.12 N/A N/A
ENST00000471499 N/A N/A N/A N/A N/A N/A N/A 0.168±0.00 N/A 1.264±0.00 N/A 0.146±0.03 N/A N/A
ENSG00000125817 ENST00000379751 63.308±0.00 61.165±0.00 1.929±0.00 24.607±20.89 33.745±29.42 28.267±24.95 14.403±11.63 22.896±18.82 13.126±7.09 18.187±15.45 42.306±32.71 48.228±41.43 34.259±4.35 22.811±16.97
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027329 ENSMUST00000028801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.942±0.11
ENSMUST00000110218 N/A N/A N/A 15.370±0.00 N/A N/A N/A N/A N/A N/A N/A 7.806±0.25 N/A 13.538±1.21
ENSMUST00000127987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027330 ENSMUST00000028804 N/A N/A N/A N/A N/A N/A N/A N/A 51.485±19.51 N/A N/A N/A 3.820±0.15 N/A
ENSMUST00000079857 22.777±0.49 N/A 13.614±0.00 11.640±3.25 15.522±3.70 19.018±0.00 N/A N/A 63.027±23.37 20.135±1.76 N/A 17.230±6.73 4.913±0.70 N/A
ENSMUST00000125423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000068267 ENSMUST00000089510 59.458±2.08 66.033±9.53 44.217±8.89 29.078±2.61 48.438±19.76 82.560±3.33 28.527±4.87 58.164±6.20 17.969±4.55 81.803±11.70 28.721±1.43 62.317±24.00 9.612±2.09 4.865±0.60

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