C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00033D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101220-ENSG00000101222 CGP 9606 20:3753508-3781448
GeneTranscriptPositionBiotype
ENSG00000101220 (C20orf27)
chromosome 20 open reading frame 27 		ENST00000217195 (C20orf27-002) 3753508-3767728 protein_coding
ENST00000379772 (C20orf27-001) 3753508-3768387 protein_coding
ENST00000399672 (C20orf27-005) 3753508-3767781 protein_coding
ENST00000399683 (C20orf27-004) 3753508-3758678 protein_coding
ENSG00000101222 (SPEF1)
sperm flagellar 1 		ENST00000379756 (SPEF1-003) 3777504-3781448 protein_coding
ENST00000463490 (SPEF1-002) 3777504-3781448 processed_transcript
ENST00000471499 (SPEF1-001) 3777504-3781448 processed_transcript
CIL_00033D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027327-ENSMUSG00000027329 CGP 10090 2:131146324-131187282
GeneTranscriptPositionBiotype
ENSMUSG00000027327 (1700037H04Rik)
RIKEN cDNA 1700037H04 gene 		ENSMUST00000028800 (1700037H04Rik-002) 131146804-131160081 protein_coding
ENSMUST00000103188 (1700037H04Rik-001) 131146325-131160020 protein_coding
ENSMUST00000133602 (1700037H04Rik-005) 131147161-131160042 protein_coding
ENSMUST00000136838 (1700037H04Rik-004) 131146325-131149028 retained_intron
ENSMUST00000152961 (1700037H04Rik-007) 131148281-131160042 processed_transcript
ENSMUST00000184121 (1700037H04Rik-006) 131146794-131160024 nonsense_mediated_decay
ENSMUST00000184535 (1700037H04Rik-003) 131146324-131160034 nonsense_mediated_decay
ENSMUSG00000027329 (Spef1)
sperm flagellar 1 		ENSMUST00000028801 (Spef1-001) 131170261-131187282 protein_coding
ENSMUST00000110218 (Spef1-002) 131170316-131175201 protein_coding
ENSMUST00000127987 (Spef1-003) 131171611-131174653 protein_coding
ENSMUSG00000027330 (Cdc25b)
cell division cycle 25B 		ENSMUST00000028804 (Cdc25b-001) 131186949-131198495 protein_coding
ENSMUST00000079857 (Cdc25b-002) 131186958-131198497 protein_coding
ENSMUST00000125423 (Cdc25b-003) 131188158-131191918 retained_intron
ENSMUST00000132727 (Cdc25b-007) 131191350-131192102 retained_intron
ENSMUST00000138669 (Cdc25b-006) 131191813-131193279 retained_intron
ENSMUST00000141732 (Cdc25b-004) 131191743-131193392 retained_intron
ENSMUST00000145556 (Cdc25b-005) 131192874-131194406 retained_intron
ENSMUSG00000068267 (Cenpb)
centromere protein B 		ENSMUST00000089510 (Cenpb-001) 131175182-131180067 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033D_0001ENSG00000101220ENST00000217195ENST00000379772ENST00000399672ENST00000399683ENSG00000101222ENST00000379756ENST00000463490ENST00000471499CIL_00033D_0002ENSMUSG00000027327ENSMUST00000028800ENSMUST00000103188ENSMUST00000133602ENSMUST00000136838ENSMUST00000152961ENSMUST00000184121ENSMUST00000184535ENSMUSG00000027329ENSMUST00000028801ENSMUST00000110218ENSMUST00000127987ENSMUSG00000027330ENSMUST00000028804ENSMUST00000079857ENSMUST00000125423ENSMUST00000132727ENSMUST00000138669ENSMUST00000141732ENSMUST00000145556ENSMUSG00000068267ENSMUST00000089510
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033D_0001ENSG00000101220ENST00000217195ENST00000379772ENST00000399672ENST00000399683ENSG00000101222ENST00000379756ENST00000463490ENST00000471499CIL_00033D_0002ENSMUSG00000027327ENSMUST00000028800ENSMUST00000103188ENSMUST00000133602ENSMUST00000136838ENSMUST00000184535ENSMUSG00000027329ENSMUST00000028801ENSMUST00000110218ENSMUSG00000027330ENSMUST00000028804ENSMUST00000079857ENSMUSG00000068267ENSMUST00000089510
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101220 ENST00000217195 11.740±0.00 11.668±0.00 0.234±0.00 2.924±0.00 11.078±0.00 29.482±0.00 1.501±1.33 4.664±0.00 1.347±0.00 2.790±0.00 2.735±0.00 17.501±5.10 8.840±1.39 6.329±0.20
ENST00000379772 N/A N/A 0.289±0.00 N/A N/A N/A 1.397±0.00 0.890±0.00 0.663±0.00 0.158±0.00 0.446±0.00 50.703±0.00 3.325±0.00 N/A
ENST00000399672 2.938±0.00 3.845±0.00 N/A 2.404±1.23 3.716±3.29 4.438±4.19 0.270±0.00 2.075±0.00 0.234±0.00 2.625±0.00 0.904±0.00 2.906±2.14 3.128±0.02 3.320±1.22
ENST00000399683 7.966±0.00 18.726±0.00 N/A 5.568±2.09 15.612±0.00 13.096±0.00 1.856±0.00 1.625±1.02 2.897±1.19 1.309±0.00 3.058±0.00 12.606±2.24 4.335±1.66 9.715±0.82
ENSG00000101222 ENST00000379756 N/A N/A 0.607±0.00 3.973±0.87 0.127±0.00 0.135±0.00 0.023±0.00 0.528±0.07 N/A 1.897±1.19 N/A 2.379±2.17 N/A 10.251±3.41
ENST00000463490 N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.247±0.12 N/A N/A
ENST00000471499 N/A N/A N/A N/A N/A N/A N/A 0.168±0.00 N/A 1.264±0.00 N/A 0.146±0.03 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027327 ENSMUST00000028800 N/A N/A N/A N/A 56.254±0.00 10.953±1.44 3.891±0.91 N/A 2.150±0.36 N/A 0.440±0.00 18.603±2.98 N/A 98.132±10.82
ENSMUST00000103188 116.857±33.10 86.829±34.61 21.396±0.89 46.613±8.09 122.160±34.30 25.319±3.67 10.384±3.74 39.526±0.89 43.948±45.67 17.236±1.60 1.977±1.29 37.174±11.27 22.344±5.28 231.082±112.32
ENSMUST00000133602 N/A N/A N/A N/A 35.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136838 N/A 20.524±7.09 3.115±0.09 1.921±0.00 19.976±0.00 N/A 1.797±0.67 N/A 0.687±0.00 4.005±0.27 0.727±0.15 3.383±0.36 3.139±0.86 1.522±0.00
ENSMUST00000152961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184535 N/A N/A N/A N/A 29.251±5.57 9.960±1.86 N/A N/A 1.023±0.27 4.909±1.40 N/A 11.507±2.52 N/A N/A
ENSMUSG00000027329 ENSMUST00000028801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.942±0.11
ENSMUST00000110218 N/A N/A N/A 15.370±0.00 N/A N/A N/A N/A N/A N/A N/A 7.806±0.25 N/A 13.538±1.21
ENSMUST00000127987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027330 ENSMUST00000028804 N/A N/A N/A N/A N/A N/A N/A N/A 51.485±19.51 N/A N/A N/A 3.820±0.15 N/A
ENSMUST00000079857 22.777±0.49 N/A 13.614±0.00 11.640±3.25 15.522±3.70 19.018±0.00 N/A N/A 63.027±23.37 20.135±1.76 N/A 17.230±6.73 4.913±0.70 N/A
ENSMUST00000125423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000068267 ENSMUST00000089510 59.458±2.08 66.033±9.53 44.217±8.89 29.078±2.61 48.438±19.76 82.560±3.33 28.527±4.87 58.164±6.20 17.969±4.55 81.803±11.70 28.721±1.43 62.317±24.00 9.612±2.09 4.865±0.60

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