C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAS guanyl releasing protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027347 Rasgrp1 10090 - 2:117279993-117343001 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102534 Rasgrp1-001 117279993-117343001 protein_coding
  ENSMUST00000110898 Rasgrp1-002 117298093-117342925 retained_intron
  ENSMUST00000172901 Rasgrp1-004 117282542-117342709 protein_coding
  ENSMUST00000173252 Rasgrp1-006 117282542-117342709 protein_coding
  ENSMUST00000173541 Rasgrp1-005 117282542-117342709 protein_coding
  ENSMUST00000174770 Rasgrp1-003 117282542-117342709 nonsense_mediated_decay
  ENSMUST00000178884 Rasgrp1-201 117279994-117342877 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102534ENSMUST00000110898ENSMUST00000172901ENSMUST00000173541ENSMUST00000174770ENSMUST00000178884
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102534 0.086±0.03 0.085±0.01 0.075±0.00 0.176±0.00 1.401±0.11 0.224±0.00 N/A 0.309±0.21 0.196±0.00 0.345±0.00 0.002±0.00 0.787±0.45 0.067±0.00 N/A
ENSMUST00000110898 N/A 0.760±0.33 N/A N/A 4.750±1.36 0.379±0.02 N/A N/A 0.276±0.00 N/A N/A 0.845±0.38 N/A N/A
ENSMUST00000172901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.625±0.03 N/A N/A
ENSMUST00000173541 N/A 0.064±0.00 N/A 33.297±0.00 N/A N/A N/A N/A N/A N/A N/A 0.606±0.16 N/A 0.125±0.03
ENSMUST00000174770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 0.349±0.00 N/A 0.030±0.02
ENSMUST00000178884 0.553±0.29 0.138±0.06 0.366±0.00 13.657±17.94 7.400±1.65 0.361±0.09 0.247±0.07 1.206±0.25 0.328±0.14 1.644±0.45 0.139±0.22 1.123±1.18 1.161±1.01 0.048±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RQ CIL_0002RQ_0002 CGP 2:117249739-117343001

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001816 IMP cytokine production
GO:0002437 IMP inflammatory response to antigenic stimulus
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005509 IEA calcium ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0007265 IEA Ras protein signal transduction
GO:0014066 IMP regulation of phosphatidylinositol 3-kinase signaling
GO:0030154 IEA cell differentiation
GO:0032252 IMP secretory granule localization
GO:0032856 IMP activation of Ras GTPase activity
GO:0032862 IMP activation of Rho GTPase activity
GO:0042629 IMP mast cell granule
GO:0043303 IMP mast cell degranulation
GO:0047496 IMP vesicle transport along microtubule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000172575 RASGRP1 RAS guanyl releasing protein 1 (calcium and DAG-regulated) protein_coding Homo_sapiens

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