C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS guanyl releasing protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178884 Rasgrp1-201 ENSMUSG00000027347 10090 - 2:117279994-117342877 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000178884
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000178884 0.553±0.29 0.138±0.06 0.366±0.00 13.657±17.94 7.400±1.65 0.361±0.09 0.247±0.07 1.206±0.25 0.328±0.14 1.644±0.45 0.139±0.22 1.123±1.18 1.161±1.01 0.048±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RQ CIL_0002RQ_0002 CGP 2:117249739-117343001

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001816 IMP cytokine production
GO:0002437 IMP inflammatory response to antigenic stimulus
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005509 IEA calcium ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0007265 IEA Ras protein signal transduction
GO:0014066 IMP regulation of phosphatidylinositol 3-kinase signaling
GO:0030154 IEA cell differentiation
GO:0032252 IMP secretory granule localization
GO:0032856 IMP activation of Ras GTPase activity
GO:0032862 IMP activation of Rho GTPase activity
GO:0042629 IMP mast cell granule
GO:0043303 IMP mast cell degranulation
GO:0047496 IMP vesicle transport along microtubule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310803 RASGRP1-001 protein_coding Homo_sapiens 0 2689
ENST00000414708 RASGRP1-004 nonsense_mediated_decay Homo_sapiens 0 1596
ENST00000450598 RASGRP1-005 protein_coding Homo_sapiens 0 1596
ENST00000539159 RASGRP1-201 protein_coding Homo_sapiens 0 2678
ENST00000558164 RASGRP1-006 protein_coding Homo_sapiens 0 1596
ENST00000558418 RASGRP1-010 protein_coding Homo_sapiens 0 475
ENST00000558432 RASGRP1-007 protein_coding Homo_sapiens 0 2604
ENST00000559830 RASGRP1-003 protein_coding Homo_sapiens 0 1596
ENST00000560425 RASGRP1-011 nonsense_mediated_decay Homo_sapiens 0 575
ENST00000560929 RASGRP1-009 protein_coding Homo_sapiens 0 272
ENST00000561117 RASGRP1-008 protein_coding Homo_sapiens 0 350
ENST00000561180 RASGRP1-002 protein_coding Homo_sapiens 0 2604

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