C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin tyrosine ligase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027394 Ttl 10090 + 2:129065942-129096283 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035812 Ttl-001 129065942-129096283 protein_coding
  ENSMUST00000144120 Ttl-002 129076045-129089781 protein_coding
  ENSMUST00000144730 Ttl-003 129065985-129068105 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035812ENSMUST00000144120ENSMUST00000144730
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035812 5.375±1.01 5.126±0.58 3.836±1.01 9.939±1.39 4.089±0.67 3.999±0.14 4.355±0.41 3.900±0.27 1.339±0.53 7.198±0.33 2.621±0.16 6.982±1.70 4.590±3.68 0.270±0.10
ENSMUST00000144120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00
ENSMUST00000144730 N/A 3.613±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047U CIL_00047U_0002 CGP 2:129065942-129126594

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0004835 IMP tubulin-tyrosine ligase activity
GO:0005524 IEA ATP binding
GO:0005874 IC microtubule
GO:0006464 IEA cellular protein modification process
GO:0030516 IMP regulation of axon extension

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062418 ttl tubulin tyrosine ligase protein_coding Danio_rerio
ENSG00000114999 TTL tubulin tyrosine ligase protein_coding Homo_sapiens

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