C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin tyrosine ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035812 Ttl-001 ENSMUSG00000027394 10090 + 2:129065942-129096283 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035812
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035812 5.375±1.01 5.126±0.58 3.836±1.01 9.939±1.39 4.089±0.67 3.999±0.14 4.355±0.41 3.900±0.27 1.339±0.53 7.198±0.33 2.621±0.16 6.982±1.70 4.590±3.68 0.270±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047U CIL_00047U_0002 CGP 2:129065942-129126594

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0004835 IMP tubulin-tyrosine ligase activity
GO:0005524 IEA ATP binding
GO:0005874 IC microtubule
GO:0006464 IEA cellular protein modification process
GO:0030516 IMP regulation of axon extension

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233336 TTL-001 protein_coding Homo_sapiens 0 1423
ENST00000476615 TTL-004 retained_intron Homo_sapiens 0 593
ENST00000485537 TTL-003 processed_transcript Homo_sapiens 0 250

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