C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00047U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114999-ENSG00000125630 CGP 9606 2:112482154-112577150
GeneTranscriptPositionBiotype
ENSG00000114999 (TTL)
tubulin tyrosine ligase 		ENST00000233336 (TTL-001) 112482154-112541739 protein_coding
ENST00000460450 (TTL-002) 112522151-112532411 processed_transcript
ENST00000476615 (TTL-004) 112501286-112520680 retained_intron
ENST00000485537 (TTL-003) 112482199-112483930 processed_transcript
ENSG00000125630 (POLR1B)
polymerase (RNA) I polypeptide B, 128kDa 		ENST00000263331 (POLR1B-001) 112541915-112576299 protein_coding
ENST00000333990 (POLR1B-002) 112542189-112576299 nonsense_mediated_decay
ENST00000409894 (POLR1B-003) 112542226-112577058 protein_coding
ENST00000417433 (POLR1B-005) 112542465-112576295 protein_coding
ENST00000424062 (POLR1B-009) 112542450-112549358 nonsense_mediated_decay
ENST00000430293 (POLR1B-008) 112542419-112551979 nonsense_mediated_decay
ENST00000430769 (POLR1B-006) 112542036-112547176 protein_coding
ENST00000438748 (POLR1B-007) 112542019-112547461 protein_coding
ENST00000448770 (POLR1B-004) 112542274-112576029 nonsense_mediated_decay
ENST00000458012 (POLR1B-015) 112564362-112575089 protein_coding
ENST00000468475 (POLR1B-011) 112546934-112550908 retained_intron
ENST00000475318 (POLR1B-012) 112550707-112552804 retained_intron
ENST00000484574 (POLR1B-014) 112564314-112572598 retained_intron
ENST00000496238 (POLR1B-010) 112542675-112549360 processed_transcript
ENST00000498054 (POLR1B-013) 112553385-112559395 processed_transcript
ENST00000537335 (POLR1B-201) 112541915-112577150 protein_coding
ENST00000541869 (POLR1B-202) 112542036-112577150 protein_coding
CIL_00047U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027394-ENSMUSG00000027395 CGP 10090 2:129065942-129126594
GeneTranscriptPositionBiotype
ENSMUSG00000027394 (Ttl)
tubulin tyrosine ligase 		ENSMUST00000035812 (Ttl-001) 129065942-129096283 protein_coding
ENSMUST00000144120 (Ttl-002) 129076045-129089781 protein_coding
ENSMUST00000144730 (Ttl-003) 129065985-129068105 processed_transcript
ENSMUSG00000027395 (Polr1b)
polymerase (RNA) I polypeptide B 		ENSMUST00000028874 (Polr1b-002) 129101027-129120768 protein_coding
ENSMUST00000103205 (Polr1b-001) 129100995-129126594 protein_coding
ENSMUST00000133345 (Polr1b-005) 129115672-129118489 processed_transcript
ENSMUST00000144004 (Polr1b-004) 129118654-129123138 processed_transcript
ENSMUST00000147727 (Polr1b-003) 129121711-129123838 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047U_0001ENSG00000114999ENST00000233336ENST00000460450ENST00000476615ENST00000485537ENSG00000125630ENST00000263331ENST00000333990ENST00000409894ENST00000417433ENST00000424062ENST00000430293ENST00000430769ENST00000438748ENST00000448770ENST00000458012ENST00000468475ENST00000475318ENST00000484574ENST00000496238ENST00000498054ENST00000537335ENST00000541869CIL_00047U_0002ENSMUSG00000027394ENSMUST00000035812ENSMUST00000144120ENSMUST00000144730ENSMUSG00000027395ENSMUST00000028874ENSMUST00000103205ENSMUST00000133345ENSMUST00000144004ENSMUST00000147727
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047U_0001ENSG00000114999ENST00000233336ENST00000460450ENSG00000125630ENST00000263331ENST00000333990ENST00000409894ENST00000417433ENST00000448770ENST00000458012ENST00000484574ENST00000537335ENST00000541869CIL_00047U_0002ENSMUSG00000027394ENSMUST00000035812ENSMUST00000144120ENSMUST00000144730ENSMUSG00000027395ENSMUST00000028874ENSMUST00000103205ENSMUST00000144004
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114999 ENST00000233336 N/A 0.475±0.00 N/A 0.824±0.50 0.470±0.00 0.249±0.16 0.248±0.13 0.256±0.20 0.187±0.03 0.335±0.00 0.305±0.19 0.335±0.10 0.193±0.04 0.281±0.13
ENST00000460450 7.251±0.00 3.960±0.00 1.890±0.00 9.079±0.72 4.693±0.69 2.877±1.02 5.656±2.71 3.332±2.53 3.116±0.51 4.516±0.70 5.385±2.50 7.008±3.35 4.676±1.36 3.606±0.46
ENST00000476615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125630 ENST00000263331 N/A N/A N/A N/A N/A N/A N/A N/A 0.366±0.00 N/A N/A 1.580±0.00 0.887±0.00 2.030±0.00
ENST00000333990 N/A 1.868±0.00 N/A N/A N/A N/A 0.203±0.05 N/A N/A N/A N/A N/A N/A N/A
ENST00000409894 N/A N/A 0.324±0.00 0.550±0.00 N/A 0.345±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417433 0.398±0.00 0.880±0.00 N/A 0.639±0.00 1.041±0.53 1.436±0.41 0.735±0.00 3.749±0.00 1.178±0.71 0.914±0.00 2.724±0.00 1.963±0.25 0.972±0.35 1.876±0.00
ENST00000424062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448770 0.600±0.00 1.600±0.00 0.763±0.00 N/A 3.424±0.00 N/A 0.554±0.00 1.786±0.19 1.199±0.20 1.000±0.07 1.164±0.00 4.185±1.66 1.417±0.72 9.035±2.45
ENST00000458012 N/A N/A 2.335±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484574 N/A N/A N/A N/A N/A 3.532±0.00 N/A N/A N/A N/A 1.362±0.00 N/A N/A N/A
ENST00000496238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.266±0.00
ENST00000541869 0.799±0.00 N/A N/A 0.300±0.00 N/A N/A 0.088±0.00 N/A N/A 0.763±0.00 N/A 1.595±0.60 0.832±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027394 ENSMUST00000035812 5.375±1.01 5.126±0.58 3.836±1.01 9.939±1.39 4.089±0.67 3.999±0.14 4.355±0.41 3.900±0.27 1.339±0.53 7.198±0.33 2.621±0.16 6.982±1.70 4.590±3.68 0.270±0.10
ENSMUST00000144120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00
ENSMUST00000144730 N/A 3.613±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027395 ENSMUST00000028874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00
ENSMUST00000103205 6.056±3.40 3.872±0.96 4.503±0.53 4.889±1.85 4.270±1.32 4.282±1.06 2.301±0.11 4.415±0.74 4.647±2.36 3.715±0.66 3.294±0.17 6.192±1.91 4.499±2.27 1.227±0.11
ENSMUST00000133345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144004 N/A 4.657±0.45 N/A N/A 5.526±0.49 4.820±0.83 N/A N/A 4.717±0.00 3.541±0.62 N/A 8.561±0.80 N/A N/A
ENSMUST00000147727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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