Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	beaded filament structural protein 1, in lens-CP94
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000027420	Bfsp1	10090	-	2:143826528-143863173	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000028907		Bfsp1-001	143826528-143863173	protein_coding
	ENSMUST00000099296		Bfsp1-002	143826528-143862943	protein_coding
Mus musculus EnsemblGRCm38 Genome Exciting message Genes Gene structures from Ensembl Connecting Transcripts Structures from Ensembl Connecting Powered by Dalliance 0.11.11

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000028907	0.505±0.16	0.436±0.28	0.924±0.12	0.371±0.02	0.228±0.04	2.025±0.14	0.141±0.04	0.203±0.06	0.081±0.05	0.420±0.22	0.075±0.06	0.495±0.19	0.874±0.38	0.365±0.09
ENSMUST00000099296	0.095±0.02	0.254±0.00	0.140±0.00	0.439±0.00	0.198±0.15	1.556±0.27	0.083±0.00	0.084±0.04	0.025±0.01	0.343±0.08	0.114±0.07	0.744±0.23	1.068±1.12	0.677±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007A3	CIL_0007A3_0003	CGP	2:143546156-143863173
CIL_0002DJ	CIL_0002DJ_0002	CGP	2:143826528-143943324

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005212	IDA	structural constituent of eye lens
GO:0005515	IPI	protein binding
GO:0005737	IDA	cytoplasm
GO:0005739	IEA	mitochondrion
GO:0005882	IDA	intermediate filament
GO:0005886	IEA	plasma membrane
GO:0015629	IEA	actin cytoskeleton
GO:0048469	IMP	cell maturation
GO:0070307	IDA	lens fiber cell development

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000074919	CU929052.1	Uncharacterized protein	protein_coding	Danio_rerio
ENSG00000125864	BFSP1	beaded filament structural protein 1, filensin	protein_coding	Homo_sapiens

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