C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002DJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125864-ENSG00000125868 CGP 9606 20:17493905-17609919
GeneTranscriptPositionBiotype
ENSG00000125864 (BFSP1)
beaded filament structural protein 1, filensin 		ENST00000377868 (BFSP1-002) 17493905-17558960 protein_coding
ENST00000377873 (BFSP1-001) 17493905-17531369 protein_coding
ENST00000473415 (BFSP1-003) 17511992-17569220 processed_transcript
ENST00000492424 (BFSP1-004) 17506828-17514741 processed_transcript
ENST00000536626 (BFSP1-201) 17493906-17569220 protein_coding
ENSG00000202260 (RN7SKP69)
RNA, 7SK small nuclear pseudogene 69 		ENST00000365390 (RN7SKP69-201) 17576206-17576510 misc_RNA
ENSG00000230495 (RP11-462D18.2)
 ENST00000434165 (RP11-462D18.2-001) 17599255-17599807 processed_pseudogene
ENSG00000232333 (RPS27AP2)
ribosomal protein S27a pseudogene 2 		ENST00000457576 (RPS27AP2-001) 17516843-17517307 processed_pseudogene
ENSG00000277373 (RP11-462D18.4)
 ENST00000610812 (RP11-462D18.4-001) 17565501-17565851 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0002DJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027420-ENSMUSG00000015932 CGP 10090 2:143826528-143943324
GeneTranscriptPositionBiotype
ENSMUSG00000015932 (Dstn)
destrin 		ENSMUST00000103172 (Dstn-001) 143915320-143943324 protein_coding
ENSMUSG00000027420 (Bfsp1)
beaded filament structural protein 1, in lens-CP94 		ENSMUST00000028907 (Bfsp1-001) 143826528-143863173 protein_coding
ENSMUST00000099296 (Bfsp1-002) 143826528-143862943 protein_coding
ENSMUSG00000080711 (Gm11686)
predicted gene 11686 		ENSMUST00000122397 (Gm11686-001) 143881177-143881509 processed_pseudogene
ENSMUSG00000082987 (Rps13-ps6)
ribosomal protein S13, pseudogene 6 		ENSMUST00000120038 (Rps13-ps6-001) 143855649-143856076 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DJ_0001ENSG00000125864ENST00000377868ENST00000377873ENST00000473415ENST00000492424ENST00000536626ENSG00000202260ENST00000365390ENSG00000230495ENST00000434165ENSG00000232333ENST00000457576ENSG00000277373ENST00000610812CIL_0002DJ_0002ENSMUSG00000015932ENSMUST00000103172ENSMUSG00000027420ENSMUST00000028907ENSMUST00000099296ENSMUSG00000080711ENSMUST00000122397ENSMUSG00000082987ENSMUST00000120038
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DJ_0001ENSG00000125864ENST00000377868ENST00000377873ENST00000492424ENST00000536626ENSG00000202260ENST00000365390ENSG00000230495ENST00000434165ENSG00000232333ENST00000457576ENSG00000277373ENST00000610812CIL_0002DJ_0002ENSMUSG00000015932ENSMUST00000103172ENSMUSG00000027420ENSMUST00000028907ENSMUST00000099296ENSMUSG00000080711ENSMUST00000122397ENSMUSG00000082987ENSMUST00000120038
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125864 ENST00000377868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.368±0.00 0.839±0.00 N/A
ENST00000377873 0.208±0.00 1.049±0.00 N/A 1.039±0.25 0.557±0.43 0.236±0.17 0.132±0.10 0.805±0.00 0.310±0.14 0.209±0.11 N/A 1.713±0.94 1.725±0.39 3.596±2.81
ENST00000473415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492424 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.447±0.00 N/A N/A N/A N/A
ENST00000536626 N/A 0.277±0.00 0.119±0.00 N/A N/A 0.220±0.14 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000202260 ENST00000365390 N/A N/A N/A N/A 0.463±0.00 N/A N/A 0.314±0.00 N/A N/A N/A 0.264±0.06 0.197±0.00 N/A
ENSG00000230495 ENST00000434165 N/A N/A N/A 0.031±0.00 0.543±0.15 1.410±0.00 0.318±0.00 0.259±0.00 0.509±0.00 N/A N/A 0.123±0.07 N/A 0.210±0.00
ENSG00000232333 ENST00000457576 N/A N/A N/A N/A 0.112±0.00 0.026±0.00 N/A N/A N/A N/A 0.049±0.00 0.071±0.03 N/A 0.171±0.00
ENSG00000277373 ENST00000610812 N/A 0.030±0.00 N/A 0.061±0.00 0.083±0.00 N/A 0.085±0.00 N/A N/A N/A N/A 0.478±0.14 0.153±0.00 0.364±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015932 ENSMUST00000103172 52.849±20.02 21.230±4.18 616.076±26.46 47.513±5.91 19.699±5.34 101.238±11.01 29.668±3.13 40.026±7.19 28.993±8.84 58.459±7.06 8.637±1.76 70.764±68.34 123.997±26.93 8.453±0.83
ENSMUSG00000027420 ENSMUST00000028907 0.505±0.16 0.436±0.28 0.924±0.12 0.371±0.02 0.228±0.04 2.025±0.14 0.141±0.04 0.203±0.06 0.081±0.05 0.420±0.22 0.075±0.06 0.495±0.19 0.874±0.38 0.365±0.09
ENSMUST00000099296 0.095±0.02 0.254±0.00 0.140±0.00 0.439±0.00 0.198±0.15 1.556±0.27 0.083±0.00 0.084±0.04 0.025±0.01 0.343±0.08 0.114±0.07 0.744±0.23 1.068±1.12 0.677±0.00
ENSMUSG00000080711 ENSMUST00000122397 N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A 0.061±0.00 N/A 0.168±0.00 0.243±0.00 0.221±0.12 N/A
ENSMUSG00000082987 ENSMUST00000120038 N/A N/A 0.031±0.00 0.110±0.00 N/A N/A N/A N/A N/A 0.155±0.00 N/A 0.164±0.00 0.105±0.05 N/A

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