C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beaded filament structural protein 1, in lens-CP94
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099296 Bfsp1-002 ENSMUSG00000027420 10090 - 2:143826528-143862943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099296
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099296 0.095±0.02 0.254±0.00 0.140±0.00 0.439±0.00 0.198±0.15 1.556±0.27 0.083±0.00 0.084±0.04 0.025±0.01 0.343±0.08 0.114±0.07 0.744±0.23 1.068±1.12 0.677±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007A3 CIL_0007A3_0003 CGP 2:143546156-143863173
CIL_0002DJ CIL_0002DJ_0002 CGP 2:143826528-143943324

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005212 IDA structural constituent of eye lens
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005882 IDA intermediate filament
GO:0005886 IEA plasma membrane
GO:0015629 IEA actin cytoskeleton
GO:0048469 IMP cell maturation
GO:0070307 IDA lens fiber cell development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377873 BFSP1-001 protein_coding Homo_sapiens 0 1092

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