C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tumor protein D52
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027506 Tpd52 10090 - 3:8928626-9004723 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063496 Tpd52-011 8930956-9004439 protein_coding
  ENSMUST00000091354 Tpd52-002 8929598-8964046 protein_coding
  ENSMUST00000091355 Tpd52-003 8928626-9004478 protein_coding
  ENSMUST00000094381 Tpd52-008 8930788-8964048 protein_coding
  ENSMUST00000120143 Tpd52-001 8928626-9004723 protein_coding
  ENSMUST00000121038 Tpd52-006 8930892-8993890 protein_coding
  ENSMUST00000124956 Tpd52-007 8944696-8988636 protein_coding
  ENSMUST00000129736 Tpd52-010 8947504-9004437 processed_transcript
  ENSMUST00000134788 Tpd52-004 8931139-9004478 protein_coding
  ENSMUST00000145905 Tpd52-009 8931064-8962253 protein_coding
  ENSMUST00000155450 Tpd52-005 8947566-9004478 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063496ENSMUST00000091354ENSMUST00000091355ENSMUST00000094381ENSMUST00000120143ENSMUST00000121038ENSMUST00000134788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063496 N/A N/A N/A 13.675±0.00 N/A N/A N/A N/A N/A N/A 4.356±0.34 12.439±0.00 16.767±4.60 1.117±0.00
ENSMUST00000091354 6.365±2.38 4.426±1.20 22.586±2.25 4.759±1.55 8.919±4.69 36.224±7.51 4.608±0.13 26.740±2.99 2.581±1.32 11.846±2.97 3.919±1.66 10.782±4.25 19.445±7.49 2.423±0.12
ENSMUST00000091355 N/A 2.882±0.20 N/A 1.526±0.08 N/A N/A N/A N/A 1.036±0.00 N/A 0.910±0.06 2.835±0.86 2.759±0.50 N/A
ENSMUST00000094381 N/A N/A N/A N/A N/A 18.723±2.89 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000120143 3.183±1.96 8.752±4.80 6.629±2.28 1.104±0.09 6.643±3.00 40.077±7.60 1.042±0.37 11.563±2.41 2.555±0.60 9.860±1.27 1.136±0.32 10.785±2.52 9.153±5.77 0.969±0.38
ENSMUST00000121038 N/A 6.485±1.24 N/A N/A N/A N/A N/A N/A 1.676±0.14 N/A N/A N/A N/A N/A
ENSMUST00000134788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.824±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LP CIL_0008LP_0002 VISTA 3:8565055-9167293
CIL_0001NG CIL_0001NG_0002 CGP 3:8928626-9285333

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 ISS calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0008284 IDA positive regulation of cell proliferation
GO:0030183 ISS B cell differentiation
GO:0042803 IDA protein homodimerization activity
GO:0046982 IDA protein heterodimerization activity
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061713 tpd52 tumor protein D52 protein_coding Danio_rerio
ENSG00000076554 TPD52 tumor protein D52 protein_coding Homo_sapiens

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