C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nitrogen fixation gene 1 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027618 Nfs1 10090 - 2:156123639-156144186 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029147 Nfs1-001 156123639-156144186 protein_coding
  ENSMUST00000109600 Nfs1-002 156141787-156144180 protein_coding
  ENSMUST00000125449 Nfs1-003 156138507-156144153 retained_intron
  ENSMUST00000184469 Nfs1-007 156123650-156139809 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029147ENSMUST00000109600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029147 38.457±5.08 42.764±1.48 25.462±4.19 19.335±5.64 36.478±3.50 26.417±1.05 47.340±1.67 60.465±4.03 38.458±8.42 26.873±0.56 49.159±1.46 35.248±4.70 26.734±5.36 23.097±6.17
ENSMUST00000109600 N/A 145.816±55.75 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_0006AA CIL_0006AA_0002 CGP 2:156091958-156144186
CIL_000135 CIL_000135_0002 CGP 2:156123639-156145797

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005759 IDA mitochondrial matrix
GO:0005829 IEA cytosol
GO:0006534 IEA cysteine metabolic process
GO:0006777 IEA Mo-molybdopterin cofactor biosynthetic process
GO:0008152 IEA metabolic process
GO:0018283 IDA iron incorporation into metallo-sulfur cluster
GO:0030170 IEA pyridoxal phosphate binding
GO:0031071 IEA cysteine desulfurase activity
GO:0042803 IEA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062237 nfs1 NFS1 nitrogen fixation 1 (S. cerevisiae) protein_coding Danio_rerio
ENSG00000244005 NFS1 NFS1 cysteine desulfurase protein_coding Homo_sapiens

Loading