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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ral GTPase activating protein, beta subunit (non-catalytic)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027652 Ralgapb 10090 + 2:158409848-158499253 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046274 Ralgapb-201 158409853-158499253 protein_coding
  ENSMUST00000109485 Ralgapb-009 158409951-158497646 protein_coding
  ENSMUST00000109486 Ralgapb-001 158409848-158499253 protein_coding
  ENSMUST00000141497 Ralgapb-002 158436554-158499253 protein_coding
  ENSMUST00000143394 Ralgapb-006 158409879-158439646 retained_intron
  ENSMUST00000150420 Ralgapb-004 158465895-158473405 retained_intron
  ENSMUST00000150789 Ralgapb-005 158409876-158428052 retained_intron
  ENSMUST00000156281 Ralgapb-003 158410102-158420900 protein_coding
  ENSMUST00000173137 Ralgapb-007 158409882-158443297 processed_transcript
  ENSMUST00000173458 Ralgapb-008 158477729-158484699 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046274ENSMUST00000109485ENSMUST00000109486ENSMUST00000141497ENSMUST00000150420ENSMUST00000173137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046274 5.149±1.21 4.828±1.09 3.631±0.57 5.491±0.50 4.357±0.77 2.976±0.84 2.902±0.69 4.142±0.57 0.922±0.28 5.948±1.42 3.178±0.86 4.559±1.76 2.209±1.36 2.853±1.21
ENSMUST00000109485 N/A N/A N/A 7.596±0.00 N/A N/A N/A N/A N/A N/A N/A 4.264±0.00 2.921±1.28 1.642±0.00
ENSMUST00000109486 5.205±1.24 3.437±1.53 2.013±0.64 5.015±0.87 5.578±1.05 6.858±1.78 2.117±0.21 5.375±0.54 1.724±0.89 6.483±1.27 N/A 4.698±2.09 3.151±0.54 3.005±0.53
ENSMUST00000141497 N/A 3.746±0.97 N/A 5.223±2.00 N/A N/A 0.668±0.00 1.980±0.00 0.843±0.46 N/A 1.374±0.41 3.175±0.25 2.016±0.97 0.586±0.00
ENSMUST00000150420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.783±0.00 15.341±1.88 5.137±0.00
ENSMUST00000173137 N/A 6.357±0.96 N/A N/A 6.803±1.58 7.039±1.15 N/A N/A 1.595±0.07 N/A N/A 11.568±2.55 N/A 3.369±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0002 VISTA 2:158139041-158740388
CIL_0004O2 CIL_0004O2_0002 CGP 2:158409848-158508198

Gene Ontology

GO IDEvidence TypeGO Description
GO:0017123 IGI Ral GTPase activator activity
GO:0032484 IMP Ral protein signal transduction
GO:0032859 IGI activation of Ral GTPase activity
GO:0032880 IMP regulation of protein localization
GO:0060178 IMP regulation of exocyst localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088899 ralgapb Ral GTPase activating protein, beta subunit (non-catalytic) protein_coding Danio_rerio
ENSG00000170471 RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic) protein_coding Homo_sapiens

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