C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GTPase activating protein, beta subunit (non-catalytic)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046274 Ralgapb-201 ENSMUSG00000027652 10090 + 2:158409853-158499253 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046274 5.149±1.21 4.828±1.09 3.631±0.57 5.491±0.50 4.357±0.77 2.976±0.84 2.902±0.69 4.142±0.57 0.922±0.28 5.948±1.42 3.178±0.86 4.559±1.76 2.209±1.36 2.853±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0002 VISTA 2:158139041-158740388
CIL_0004O2 CIL_0004O2_0002 CGP 2:158409848-158508198

Gene Ontology

GO IDEvidence TypeGO Description
GO:0017123 IGI Ral GTPase activator activity
GO:0032484 IMP Ral protein signal transduction
GO:0032859 IGI activation of Ral GTPase activity
GO:0032880 IMP regulation of protein localization
GO:0060178 IMP regulation of exocyst localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262879 RALGAPB-001 protein_coding Homo_sapiens 0 6907
ENST00000397040 RALGAPB-006 protein_coding Homo_sapiens 0 6663
ENST00000397042 RALGAPB-005 protein_coding Homo_sapiens 0 6972
ENST00000438490 RALGAPB-008 protein_coding Homo_sapiens 0 5631
ENST00000461147 RALGAPB-009 retained_intron Homo_sapiens 0 1022
ENST00000461423 RALGAPB-007 retained_intron Homo_sapiens 0 3097
ENST00000495949 RALGAPB-004 processed_transcript Homo_sapiens 0 403

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