C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ral GTPase activating protein, beta subunit (non-catalytic)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170471 RALGAPB 9606 + 20:38472816-38578861 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262879 RALGAPB-001 38472816-38578861 protein_coding
  ENST00000397040 RALGAPB-006 38472900-38578859 protein_coding
  ENST00000397042 RALGAPB-005 38472816-38578859 protein_coding
  ENST00000438490 RALGAPB-008 38497480-38575070 protein_coding
  ENST00000461147 RALGAPB-009 38568467-38578065 retained_intron
  ENST00000461423 RALGAPB-007 38509085-38548106 retained_intron
  ENST00000490114 RALGAPB-002 38573659-38575993 processed_transcript
  ENST00000495949 RALGAPB-004 38497438-38500003 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262879ENST00000397040ENST00000397042ENST00000438490ENST00000461147ENST00000461423
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262879 0.798±0.00 N/A N/A 1.219±0.00 2.284±0.00 N/A 2.708±0.00 2.898±0.00 N/A N/A 0.809±0.00 1.110±0.00 N/A 6.389±0.00
ENST00000397040 1.218±0.00 1.469±0.00 N/A 1.602±0.00 N/A 1.466±0.00 N/A N/A 1.980±1.18 N/A N/A 3.568±1.20 2.050±0.20 7.086±0.00
ENST00000397042 3.034±0.00 1.726±0.00 1.220±0.00 1.930±0.41 1.127±0.00 2.429±1.22 0.906±0.63 1.199±0.87 0.359±0.00 1.949±0.27 N/A 1.702±0.76 1.168±0.00 1.493±0.00
ENST00000438490 N/A N/A 1.419±0.00 N/A 5.322±0.00 3.894±0.00 1.098±0.28 1.571±0.00 N/A 2.135±0.08 1.311±0.64 5.078±0.00 5.023±0.00 11.257±7.22
ENST00000461147 N/A N/A 0.977±0.00 N/A N/A N/A N/A 0.574±0.00 2.878±0.00 1.865±0.00 N/A 2.653±0.00 N/A N/A
ENST00000461423 N/A N/A N/A N/A N/A N/A N/A 0.800±0.00 N/A N/A N/A 2.841±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0001 VISTA 20:38219747-38821106
CIL_0004O2 CIL_0004O2_0001 CGP 20:38472816-38588463

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005488 IEA binding
GO:0017123 ISS Ral GTPase activator activity
GO:0032484 IEA Ral protein signal transduction
GO:0032859 ISS activation of Ral GTPase activity
GO:0032880 IEA regulation of protein localization
GO:0043547 IEA positive regulation of GTPase activity
GO:0046982 ISS protein heterodimerization activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction
GO:0060178 IEA regulation of exocyst localization
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088899 ralgapb Ral GTPase activating protein, beta subunit (non-catalytic) protein_coding Danio_rerio
ENSMUSG00000027652 Ralgapb Ral GTPase activating protein, beta subunit (non-catalytic) protein_coding Mus_musculus

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