C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004O2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170471-ENSG00000182035 CGP 9606 20:38472816-38588463
GeneTranscriptPositionBiotype
ENSG00000170471 (RALGAPB)
Ral GTPase activating protein, beta subunit (non-catalytic) 		ENST00000262879 (RALGAPB-001) 38472816-38578861 protein_coding
ENST00000397040 (RALGAPB-006) 38472900-38578859 protein_coding
ENST00000397042 (RALGAPB-005) 38472816-38578859 protein_coding
ENST00000438490 (RALGAPB-008) 38497480-38575070 protein_coding
ENST00000461147 (RALGAPB-009) 38568467-38578065 retained_intron
ENST00000461423 (RALGAPB-007) 38509085-38548106 retained_intron
ENST00000490114 (RALGAPB-002) 38573659-38575993 processed_transcript
ENST00000495949 (RALGAPB-004) 38497438-38500003 processed_transcript
ENSG00000231307 (RPS3P2)
ribosomal protein S3 pseudogene 2 		ENST00000421346 (RPS3P2-001) 38537758-38538458 processed_pseudogene
CIL_0004O2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027652-ENSMUSG00000044405 CGP 10090 2:158409848-158508198
GeneTranscriptPositionBiotype
ENSMUSG00000027652 (Ralgapb)
Ral GTPase activating protein, beta subunit (non-catalytic) 		ENSMUST00000046274 (Ralgapb-201) 158409853-158499253 protein_coding
ENSMUST00000109485 (Ralgapb-009) 158409951-158497646 protein_coding
ENSMUST00000109486 (Ralgapb-001) 158409848-158499253 protein_coding
ENSMUST00000141497 (Ralgapb-002) 158436554-158499253 protein_coding
ENSMUST00000143394 (Ralgapb-006) 158409879-158439646 retained_intron
ENSMUST00000150420 (Ralgapb-004) 158465895-158473405 retained_intron
ENSMUST00000150789 (Ralgapb-005) 158409876-158428052 retained_intron
ENSMUST00000156281 (Ralgapb-003) 158410102-158420900 protein_coding
ENSMUST00000173137 (Ralgapb-007) 158409882-158443297 processed_transcript
ENSMUST00000173458 (Ralgapb-008) 158477729-158484699 processed_transcript
ENSMUSG00000044405 (Adig)
adipogenin 		ENSMUST00000059889 (Adig-001) 158502612-158508198 protein_coding
ENSMUST00000109484 (Adig-002) 158502653-158508198 protein_coding
ENSMUST00000148187 (Adig-003) 158502739-158505908 processed_transcript
ENSMUSG00000081800 (Gm14200)
predicted gene 14200 		ENSMUST00000122256 (Gm14200-001) 158468169-158468360 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004O2_0001ENSG00000170471ENST00000262879ENST00000397040ENST00000397042ENST00000438490ENST00000461147ENST00000461423ENST00000490114ENST00000495949ENSG00000231307ENST00000421346CIL_0004O2_0002ENSMUSG00000027652ENSMUST00000046274ENSMUST00000109485ENSMUST00000109486ENSMUST00000141497ENSMUST00000143394ENSMUST00000150420ENSMUST00000150789ENSMUST00000156281ENSMUST00000173137ENSMUST00000173458ENSMUSG00000044405ENSMUST00000059889ENSMUST00000109484ENSMUST00000148187ENSMUSG00000081800ENSMUST00000122256
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004O2_0001ENSG00000170471ENST00000262879ENST00000397040ENST00000397042ENST00000438490ENST00000461147ENST00000461423ENSG00000231307ENST00000421346CIL_0004O2_0002ENSMUSG00000027652ENSMUST00000046274ENSMUST00000109485ENSMUST00000109486ENSMUST00000141497ENSMUST00000150420ENSMUST00000173137ENSMUSG00000044405ENSMUST00000059889ENSMUST00000109484ENSMUST00000148187ENSMUSG00000081800ENSMUST00000122256
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170471 ENST00000262879 0.798±0.00 N/A N/A 1.219±0.00 2.284±0.00 N/A 2.708±0.00 2.898±0.00 N/A N/A 0.809±0.00 1.110±0.00 N/A 6.389±0.00
ENST00000397040 1.218±0.00 1.469±0.00 N/A 1.602±0.00 N/A 1.466±0.00 N/A N/A 1.980±1.18 N/A N/A 3.568±1.20 2.050±0.20 7.086±0.00
ENST00000397042 3.034±0.00 1.726±0.00 1.220±0.00 1.930±0.41 1.127±0.00 2.429±1.22 0.906±0.63 1.199±0.87 0.359±0.00 1.949±0.27 N/A 1.702±0.76 1.168±0.00 1.493±0.00
ENST00000438490 N/A N/A 1.419±0.00 N/A 5.322±0.00 3.894±0.00 1.098±0.28 1.571±0.00 N/A 2.135±0.08 1.311±0.64 5.078±0.00 5.023±0.00 11.257±7.22
ENST00000461147 N/A N/A 0.977±0.00 N/A N/A N/A N/A 0.574±0.00 2.878±0.00 1.865±0.00 N/A 2.653±0.00 N/A N/A
ENST00000461423 N/A N/A N/A N/A N/A N/A N/A 0.800±0.00 N/A N/A N/A 2.841±0.00 N/A N/A
ENST00000490114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231307 ENST00000421346 0.154±0.00 0.400±0.00 1.292±0.00 0.623±0.60 1.228±1.13 0.268±0.10 0.153±0.00 0.061±0.00 0.885±0.00 1.535±0.00 N/A 0.732±0.80 N/A 0.206±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027652 ENSMUST00000046274 5.149±1.21 4.828±1.09 3.631±0.57 5.491±0.50 4.357±0.77 2.976±0.84 2.902±0.69 4.142±0.57 0.922±0.28 5.948±1.42 3.178±0.86 4.559±1.76 2.209±1.36 2.853±1.21
ENSMUST00000109485 N/A N/A N/A 7.596±0.00 N/A N/A N/A N/A N/A N/A N/A 4.264±0.00 2.921±1.28 1.642±0.00
ENSMUST00000109486 5.205±1.24 3.437±1.53 2.013±0.64 5.015±0.87 5.578±1.05 6.858±1.78 2.117±0.21 5.375±0.54 1.724±0.89 6.483±1.27 N/A 4.698±2.09 3.151±0.54 3.005±0.53
ENSMUST00000141497 N/A 3.746±0.97 N/A 5.223±2.00 N/A N/A 0.668±0.00 1.980±0.00 0.843±0.46 N/A 1.374±0.41 3.175±0.25 2.016±0.97 0.586±0.00
ENSMUST00000143394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.783±0.00 15.341±1.88 5.137±0.00
ENSMUST00000150789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173137 N/A 6.357±0.96 N/A N/A 6.803±1.58 7.039±1.15 N/A N/A 1.595±0.07 N/A N/A 11.568±2.55 N/A 3.369±0.00
ENSMUST00000173458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000044405 ENSMUST00000059889 147.053±44.63 49.321±18.69 2.831±0.80 0.193±0.00 150.084±25.39 1.707±0.54 6.627±2.92 13.236±1.31 N/A 7.254±2.02 2.700±1.08 10.082±2.90 0.999±1.07 78.266±23.52
ENSMUST00000109484 N/A 23.721±0.00 N/A 0.295±0.00 N/A 0.555±0.00 N/A N/A 0.087±0.08 1.560±0.00 1.085±0.41 7.691±5.05 0.490±0.31 N/A
ENSMUST00000148187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.336±0.04 N/A
ENSMUSG00000081800 ENSMUST00000122256 20.034±0.00 3.301±0.23 1.274±0.00 1.418±0.08 N/A N/A 3.683±1.07 12.167±0.00 1.031±0.46 10.001±0.00 N/A 15.942±15.21 0.503±0.33 N/A

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