C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peroxisomal biogenesis factor 5-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027674 Pex5l 10090 - 3:32949408-33143247 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078226 Pex5l-001 32949634-33083029 protein_coding
  ENSMUST00000108219 Pex5l-003 32955866-33143247 protein_coding
  ENSMUST00000108221 Pex5l-006 32950630-32985079 protein_coding
  ENSMUST00000108224 Pex5l-004 32949954-33083035 protein_coding
  ENSMUST00000108225 Pex5l-201 32949408-33082068 protein_coding
  ENSMUST00000108226 Pex5l-002 32949954-33143082 protein_coding
  ENSMUST00000123218 Pex5l-007 32954337-32956357 retained_intron
  ENSMUST00000155264 Pex5l-005 33131566-33143076 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078226ENSMUST00000108219ENSMUST00000108221ENSMUST00000108224ENSMUST00000108225ENSMUST00000108226ENSMUST00000123218ENSMUST00000155264
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078226 0.094±0.01 N/A 1.734±0.00 N/A 0.237±0.09 N/A N/A 0.073±0.00 N/A N/A 0.068±0.00 0.059±0.00 N/A N/A
ENSMUST00000108219 0.335±0.25 0.608±0.33 2.740±0.45 0.549±0.00 0.165±0.00 0.701±0.14 0.047±0.00 0.143±0.06 0.030±0.00 0.040±0.00 0.041±0.01 0.346±0.15 1.017±0.68 N/A
ENSMUST00000108221 N/A N/A N/A N/A 0.477±0.07 2.914±0.00 0.153±0.01 0.501±0.21 0.054±0.04 0.124±0.01 0.081±0.00 0.537±0.20 N/A 63.267±7.92
ENSMUST00000108224 0.275±0.05 N/A N/A N/A 0.356±0.22 0.937±0.00 N/A 0.075±0.02 0.029±0.01 0.085±0.00 0.113±0.03 N/A N/A N/A
ENSMUST00000108225 0.100±0.00 N/A N/A 10.363±9.98 N/A N/A 0.072±0.00 0.095±0.01 N/A 0.112±0.01 0.043±0.01 0.094±0.00 0.688±0.50 N/A
ENSMUST00000108226 0.690±0.40 0.685±0.22 4.644±0.85 1.006±0.13 0.251±0.05 0.941±0.53 0.066±0.00 0.137±0.04 0.019±0.01 0.153±0.06 0.087±0.07 0.410±0.30 1.138±0.78 N/A
ENSMUST00000123218 N/A N/A N/A N/A N/A N/A 0.247±0.09 N/A 0.048±0.03 N/A 0.127±0.02 0.145±0.00 N/A N/A
ENSMUST00000155264 N/A 2.940±1.12 N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A 0.985±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YE CIL_0003YE_0003 CGP 3:32817546-33143247
CIL_0001FH CIL_0001FH_0002 CGP 3:32949408-33814860

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005052 IBA peroxisome matrix targeting signal-1 binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005778 IBA peroxisomal membrane
GO:0005829 IBA cytosol
GO:0016558 IBA protein import into peroxisome matrix
GO:0016560 IBA protein import into peroxisome matrix, docking
GO:0030425 IDA dendrite
GO:0042391 IDA regulation of membrane potential
GO:0043235 ISO receptor complex
GO:0043949 ISS regulation of cAMP-mediated signaling
GO:0045185 IDA maintenance of protein location

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022518 pex5la peroxisomal biogenesis factor 5-like a protein_coding Danio_rerio
ENSDARG00000074403 PEX5L (2 of 2) peroxisomal biogenesis factor 5-like protein_coding Danio_rerio
ENSG00000114757 PEX5L peroxisomal biogenesis factor 5-like protein_coding Homo_sapiens

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