C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001FH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114757-ENSG00000163728 CGP 9606 3:179794958-180617828
GeneTranscriptPositionBiotype
ENSG00000114757 (PEX5L)
peroxisomal biogenesis factor 5-like 		ENST00000263962 (PEX5L-005) 179801056-180036770 protein_coding
ENST00000392649 (PEX5L-201) 179794958-179898323 protein_coding
ENST00000461537 (PEX5L-015) 179809594-179820555 processed_transcript
ENST00000463761 (PEX5L-011) 179875444-179974211 protein_coding
ENST00000464614 (PEX5L-008) 179801739-179974078 protein_coding
ENST00000465751 (PEX5L-004) 179801817-180036926 protein_coding
ENST00000467440 (PEX5L-009) 179801649-179888191 processed_transcript
ENST00000467460 (PEX5L-001) 179794958-180036930 protein_coding
ENST00000468741 (PEX5L-006) 179801518-179974259 protein_coding
ENST00000469198 (PEX5L-017) 179875367-179973252 protein_coding
ENST00000472994 (PEX5L-003) 179801657-180036959 protein_coding
ENST00000474909 (PEX5L-010) 179900673-180037035 processed_transcript
ENST00000476138 (PEX5L-007) 179801523-179974211 protein_coding
ENST00000477829 (PEX5L-016) 179809573-179820091 retained_intron
ENST00000485199 (PEX5L-002) 179801066-180037053 protein_coding
ENST00000487198 (PEX5L-012) 179879966-179974119 processed_transcript
ENST00000491640 (PEX5L-014) 179874373-179895680 protein_coding
ENST00000496721 (PEX5L-013) 179859097-179896174 protein_coding
ENSG00000145075 (CCDC39)
coiled-coil domain containing 39 		ENST00000442201 (CCDC39-001) 180614588-180679500 protein_coding
ENST00000471307 (CCDC39-003) 180661872-180870933 protein_coding
ENST00000473854 (CCDC39-006) 180602858-180616652 protein_coding
ENST00000476379 (CCDC39-002) 180614008-180737874 nonsense_mediated_decay
ENST00000485055 (CCDC39-004) 180707589-180870178 processed_transcript
ENST00000489868 (CCDC39-007) 180609503-180616617 protein_coding
ENST00000495817 (CCDC39-005) 180708326-180871005 processed_transcript
ENSG00000163728 (TTC14)
tetratricopeptide repeat domain 14 		ENST00000296015 (TTC14-001) 180602130-180610978 protein_coding
ENST00000382584 (TTC14-005) 180602211-180617828 protein_coding
ENST00000412756 (TTC14-002) 180602193-180610974 protein_coding
ENST00000462895 (TTC14-007) 180602217-180604912 nonsense_mediated_decay
ENST00000465065 (TTC14-003) 180602195-180610974 nonsense_mediated_decay
ENST00000465625 (TTC14-010) 180608163-180610168 processed_transcript
ENST00000470669 (TTC14-004) 180602211-180610003 nonsense_mediated_decay
ENST00000487397 (TTC14-012) 180609871-180610980 processed_transcript
ENST00000491380 (TTC14-006) 180602189-180604160 protein_coding
ENST00000492617 (TTC14-008) 180602506-180605007 protein_coding
ENST00000495660 (TTC14-009) 180602562-180604607 protein_coding
ENSG00000213158 (GAPDHP36)
glyceraldehyde 3 phosphate dehydrogenase pseudogene 36 		ENST00000480688 (GAPDHP36-001) 180201136-180213108 processed_pseudogene
ENSG00000239774 (RP11-496B10.3)
 ENST00000472596 (RP11-496B10.3-001) 180566718-180601935 lincRNA
ENSG00000239880 (RP11-420J11.1)
 ENST00000493579 (RP11-420J11.1-001) 180323107-180325059 processed_pseudogene
ENSG00000241696 (RP11-420J11.2)
 ENST00000464537 (RP11-420J11.2-002) 180414212-180422380 lincRNA
ENST00000488262 (RP11-420J11.2-001) 180414174-180422506 lincRNA
ENSG00000243799 (PEX5L-AS1)
PEX5L antisense RNA 1 		ENST00000466064 (PEX5L-AS1-001) 179875376-179881609 antisense
ENSG00000244302 (PEX5L-AS2)
PEX5L antisense RNA 2 		ENST00000462801 (PEX5L-AS2-001) 179898229-179921895 antisense
ENSG00000270178 (RP11-494H4.3)
 ENST00000602704 (RP11-494H4.3-001) 179804063-179804366 lincRNA
CIL_0001FH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027674-ENSMUSG00000027677 CGP 10090 3:32949408-33814860
GeneTranscriptPositionBiotype
ENSMUSG00000027674 (Pex5l)
peroxisomal biogenesis factor 5-like 		ENSMUST00000078226 (Pex5l-001) 32949634-33083029 protein_coding
ENSMUST00000108219 (Pex5l-003) 32955866-33143247 protein_coding
ENSMUST00000108221 (Pex5l-006) 32950630-32985079 protein_coding
ENSMUST00000108224 (Pex5l-004) 32949954-33083035 protein_coding
ENSMUST00000108225 (Pex5l-201) 32949408-33082068 protein_coding
ENSMUST00000108226 (Pex5l-002) 32949954-33143082 protein_coding
ENSMUST00000123218 (Pex5l-007) 32954337-32956357 retained_intron
ENSMUST00000155264 (Pex5l-005) 33131566-33143076 processed_transcript
ENSMUSG00000027676 (Ccdc39)
coiled-coil domain containing 39 		ENSMUST00000029222 (Ccdc39-001) 33812362-33844301 protein_coding
ENSMUST00000125845 (Ccdc39-003) 33818648-33844301 retained_intron
ENSMUST00000127844 (Ccdc39-004) 33820187-33844075 processed_transcript
ENSMUST00000135728 (Ccdc39-002) 33837994-33844310 retained_intron
ENSMUST00000154577 (Ccdc39-005) 33824962-33826540 retained_intron
ENSMUSG00000027677 (Ttc14)
tetratricopeptide repeat domain 14 		ENSMUST00000076916 (Ttc14-002) 33800191-33807708 protein_coding
ENSMUST00000099153 (Ttc14-001) 33799955-33814860 protein_coding
ENSMUST00000108210 (Ttc14-008) 33800251-33809944 protein_coding
ENSMUST00000117915 (Ttc14-005) 33800213-33812291 protein_coding
ENSMUST00000127513 (Ttc14-007) 33801214-33808031 nonsense_mediated_decay
ENSMUST00000139880 (Ttc14-003) 33800191-33802934 protein_coding
ENSMUST00000142280 (Ttc14-004) 33800210-33807899 protein_coding
ENSMUST00000150294 (Ttc14-006) 33800213-33809677 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FH_0001ENSG00000114757ENST00000263962ENST00000392649ENST00000467440ENST00000467460ENST00000472994ENST00000476138ENST00000485199ENST00000487198ENST00000496721ENSG00000145075ENST00000442201ENSG00000163728ENST00000296015ENST00000382584ENST00000412756ENST00000465065ENST00000465625ENST00000491380ENSG00000213158ENST00000480688ENSG00000239774ENST00000472596ENSG00000239880ENST00000493579ENSG00000241696ENST00000464537ENST00000488262ENSG00000243799ENST00000466064ENSG00000244302ENST00000462801ENSG00000270178ENST00000602704CIL_0001FH_0002ENSMUSG00000027674ENSMUST00000078226ENSMUST00000108219ENSMUST00000108221ENSMUST00000108224ENSMUST00000108225ENSMUST00000108226ENSMUST00000123218ENSMUST00000155264ENSMUSG00000027676ENSMUST00000029222ENSMUSG00000027677ENSMUST00000076916ENSMUST00000099153ENSMUST00000108210ENSMUST00000117915ENSMUST00000127513ENSMUST00000139880ENSMUST00000142280ENSMUST00000150294
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114757 ENST00000263962 N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A N/A 0.038±0.00 N/A 0.054±0.04 N/A 1.339±0.44
ENST00000392649 N/A 0.066±0.00 N/A N/A 0.015±0.00 0.009±0.00 N/A 0.021±0.00 0.008±0.00 0.085±0.00 N/A N/A 0.006±0.00 N/A
ENST00000461537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467440 0.041±0.00 N/A N/A N/A N/A 0.094±0.00 0.181±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000467460 N/A N/A N/A 3.604±1.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472994 N/A N/A N/A 12.496±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A
ENST00000477829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485199 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A
ENST00000487198 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.745±0.00 N/A N/A N/A N/A
ENST00000491640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496721 N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000145075 ENST00000442201 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.028±0.00 N/A N/A N/A 1.108±0.00
ENST00000471307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163728 ENST00000296015 1.257±0.00 2.332±0.00 N/A 1.493±0.17 2.570±0.69 1.909±0.00 1.603±0.00 2.912±1.73 0.975±0.00 1.505±0.00 N/A 5.290±0.70 1.701±1.00 5.621±2.88
ENST00000382584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.07 2.804±0.00 N/A 1.618±0.00
ENST00000412756 0.496±0.00 1.408±0.00 2.221±0.00 2.075±1.24 2.530±0.00 1.262±0.66 0.556±0.14 0.619±0.00 1.831±1.31 3.617±2.63 0.216±0.00 3.431±1.62 0.542±0.11 6.230±0.00
ENST00000462895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465065 N/A N/A 0.919±0.00 N/A 1.046±0.00 0.918±0.00 0.294±0.00 0.509±0.00 N/A 2.813±0.00 N/A 1.328±0.00 N/A N/A
ENST00000465625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.765±0.00 N/A N/A N/A
ENST00000470669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491380 N/A N/A N/A N/A N/A N/A N/A N/A 13.373±0.00 N/A 1.378±0.00 N/A N/A N/A
ENST00000492617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213158 ENST00000480688 N/A N/A N/A 0.051±0.00 N/A 0.342±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239774 ENST00000472596 0.148±0.00 0.256±0.00 0.735±0.00 0.154±0.05 0.126±0.00 N/A 0.443±0.33 0.356±0.00 0.022±0.00 0.023±0.00 0.577±0.00 0.234±0.15 N/A 1.464±0.21
ENSG00000239880 ENST00000493579 0.006±0.00 0.013±0.00 0.014±0.00 0.020±0.00 0.007±0.00 0.006±0.00 N/A N/A N/A 0.013±0.00 N/A 0.012±0.00 N/A 0.009±0.00
ENSG00000241696 ENST00000464537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.085±0.34
ENST00000488262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.583±0.20
ENSG00000243799 ENST00000466064 0.104±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244302 ENST00000462801 N/A 0.257±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.544±8.56
ENSG00000270178 ENST00000602704 0.116±0.00 N/A 0.368±0.00 0.666±0.42 0.136±0.00 N/A 0.256±0.00 0.035±0.00 0.192±0.00 N/A 1.118±0.00 0.150±0.00 N/A 0.276±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027674 ENSMUST00000078226 0.094±0.01 N/A 1.734±0.00 N/A 0.237±0.09 N/A N/A 0.073±0.00 N/A N/A 0.068±0.00 0.059±0.00 N/A N/A
ENSMUST00000108219 0.335±0.25 0.608±0.33 2.740±0.45 0.549±0.00 0.165±0.00 0.701±0.14 0.047±0.00 0.143±0.06 0.030±0.00 0.040±0.00 0.041±0.01 0.346±0.15 1.017±0.68 N/A
ENSMUST00000108221 N/A N/A N/A N/A 0.477±0.07 2.914±0.00 0.153±0.01 0.501±0.21 0.054±0.04 0.124±0.01 0.081±0.00 0.537±0.20 N/A 63.267±7.92
ENSMUST00000108224 0.275±0.05 N/A N/A N/A 0.356±0.22 0.937±0.00 N/A 0.075±0.02 0.029±0.01 0.085±0.00 0.113±0.03 N/A N/A N/A
ENSMUST00000108225 0.100±0.00 N/A N/A 10.363±9.98 N/A N/A 0.072±0.00 0.095±0.01 N/A 0.112±0.01 0.043±0.01 0.094±0.00 0.688±0.50 N/A
ENSMUST00000108226 0.690±0.40 0.685±0.22 4.644±0.85 1.006±0.13 0.251±0.05 0.941±0.53 0.066±0.00 0.137±0.04 0.019±0.01 0.153±0.06 0.087±0.07 0.410±0.30 1.138±0.78 N/A
ENSMUST00000123218 N/A N/A N/A N/A N/A N/A 0.247±0.09 N/A 0.048±0.03 N/A 0.127±0.02 0.145±0.00 N/A N/A
ENSMUST00000155264 N/A 2.940±1.12 N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A 0.985±0.00 N/A N/A
ENSMUSG00000027676 ENSMUST00000029222 N/A N/A N/A 7.946±1.33 N/A N/A N/A N/A N/A 2.871±0.00 N/A 6.599±0.94 N/A 34.549±5.29
ENSMUST00000125845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027677 ENSMUST00000076916 4.796±2.11 8.151±2.27 N/A N/A 4.721±1.66 2.566±0.53 3.371±0.41 1.535±0.22 1.678±1.25 5.095±0.77 N/A 5.559±1.31 N/A N/A
ENSMUST00000099153 2.128±1.28 3.784±0.76 6.892±0.89 5.850±2.70 1.572±0.89 1.531±0.47 0.798±0.23 1.131±0.16 1.931±1.52 2.985±0.84 0.584±0.28 3.788±1.74 1.889±1.09 N/A
ENSMUST00000108210 N/A N/A 9.913±0.74 N/A N/A N/A N/A N/A 4.991±0.87 N/A 1.657±0.34 10.126±0.20 6.739±1.13 N/A
ENSMUST00000117915 2.022±0.73 N/A N/A 3.282±0.00 2.045±0.29 1.547±0.09 0.642±0.01 0.904±0.15 1.127±0.34 2.455±0.00 0.763±0.24 2.114±0.00 N/A N/A
ENSMUST00000127513 N/A N/A N/A 9.068±0.00 N/A N/A N/A N/A N/A N/A N/A 7.183±0.00 3.975±0.07 N/A
ENSMUST00000139880 N/A 49.024±12.09 N/A N/A 14.307±7.17 9.468±0.93 N/A 4.883±0.00 2.301±0.60 16.602±5.28 N/A 24.322±12.93 N/A N/A
ENSMUST00000142280 N/A N/A N/A N/A 5.065±0.64 4.720±1.47 N/A 2.017±0.00 1.461±0.00 8.151±0.00 N/A 8.651±2.26 N/A N/A
ENSMUST00000150294 N/A N/A N/A 4.567±0.00 N/A N/A N/A N/A N/A N/A 1.215±0.00 4.444±0.00 3.548±0.43 N/A

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