C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peroxisomal biogenesis factor 5-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108226 Pex5l-002 ENSMUSG00000027674 10090 - 3:32949954-33143082 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000108226
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000108226 0.690±0.40 0.685±0.22 4.644±0.85 1.006±0.13 0.251±0.05 0.941±0.53 0.066±0.00 0.137±0.04 0.019±0.01 0.153±0.06 0.087±0.07 0.410±0.30 1.138±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YE CIL_0003YE_0003 CGP 3:32817546-33143247
CIL_0001FH CIL_0001FH_0002 CGP 3:32949408-33814860

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005052 IBA peroxisome matrix targeting signal-1 binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005778 IBA peroxisomal membrane
GO:0005829 IBA cytosol
GO:0016558 IBA protein import into peroxisome matrix
GO:0016560 IBA protein import into peroxisome matrix, docking
GO:0030425 IDA dendrite
GO:0042391 IDA regulation of membrane potential
GO:0043235 ISO receptor complex
GO:0045185 IDA maintenance of protein location

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263962 PEX5L-005 protein_coding Homo_sapiens 0 2039
ENST00000392649 PEX5L-201 protein_coding Homo_sapiens 0 1679
ENST00000461537 PEX5L-015 processed_transcript Homo_sapiens 0 547
ENST00000463761 PEX5L-011 protein_coding Homo_sapiens 0 420
ENST00000464614 PEX5L-008 protein_coding Homo_sapiens 0 1679
ENST00000465751 PEX5L-004 protein_coding Homo_sapiens 0 2034
ENST00000467440 PEX5L-009 processed_transcript Homo_sapiens 0 1679
ENST00000467460 PEX5L-001 protein_coding Homo_sapiens 0 2039
ENST00000468741 PEX5L-006 protein_coding Homo_sapiens 0 2041
ENST00000469198 PEX5L-017 protein_coding Homo_sapiens 0 472
ENST00000472994 PEX5L-003 protein_coding Homo_sapiens 0 2097
ENST00000476138 PEX5L-007 protein_coding Homo_sapiens 0 2039
ENST00000477829 PEX5L-016 retained_intron Homo_sapiens 0 573
ENST00000485199 PEX5L-002 protein_coding Homo_sapiens 0 2041
ENST00000487198 PEX5L-012 processed_transcript Homo_sapiens 0 337
ENST00000491640 PEX5L-014 protein_coding Homo_sapiens 0 542
ENST00000496721 PEX5L-013 protein_coding Homo_sapiens 0 276

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