C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal sequence receptor, gamma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027828 Ssr3 10090 - 3:65379655-65392623 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029414 Ssr3-001 65379655-65392623 protein_coding
  ENSMUST00000119896 Ssr3-002 65382030-65392553 protein_coding
  ENSMUST00000139785 Ssr3-003 65381680-65383381 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029414 68.569±11.25 77.800±6.85 75.786±6.02 36.414±18.22 62.899±5.03 56.481±7.10 41.011±2.59 54.870±4.23 75.914±7.98 66.705±0.96 47.975±1.84 123.543±36.15 79.885±42.38 10.393±4.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000667 CIL_000667_0004 CGP 3:65109384-65392623

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005784 IEA Sec61 translocon complex
GO:0006613 IEA cotranslational protein targeting to membrane
GO:0030176 IEA integral component of endoplasmic reticulum membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014165 ssr3 signal sequence receptor, gamma protein_coding Danio_rerio
ENSDARG00000087263 ssr3 signal sequence receptor, gamma protein_coding Danio_rerio
ENSG00000114850 SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) protein_coding Homo_sapiens

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