C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ganglioside-induced differentiation-associated-protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027865 Gdap2 10090 + 3:100162381-100206981 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029459 Gdap2-001 100162381-100206981 protein_coding
  ENSMUST00000106997 Gdap2-002 100162518-100202470 protein_coding
  ENSMUST00000150223 Gdap2-003 100162544-100169997 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029459
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029459 6.151±0.72 2.812±0.22 5.560±0.71 7.941±0.16 5.813±1.39 3.469±0.16 2.953±0.32 4.804±0.84 7.076±1.73 5.957±0.41 1.760±0.28 4.470±0.83 10.498±1.22 11.417±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HM CIL_0008HM_0002 VISTA 3:100137197-100740090

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005765 IEA lysosomal membrane
GO:0032526 IDA response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021569 gdap2 ganglioside induced differentiation associated protein 2 protein_coding Danio_rerio
ENSG00000196505 GDAP2 ganglioside induced differentiation associated protein 2 protein_coding Homo_sapiens

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