C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ganglioside-induced differentiation-associated-protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029459 Gdap2-001 ENSMUSG00000027865 10090 + 3:100162381-100206981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029459
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029459 6.151±0.72 2.812±0.22 5.560±0.71 7.941±0.16 5.813±1.39 3.469±0.16 2.953±0.32 4.804±0.84 7.076±1.73 5.957±0.41 1.760±0.28 4.470±0.83 10.498±1.22 11.417±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HM CIL_0008HM_0002 VISTA 3:100137197-100740090

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005765 IEA lysosomal membrane
GO:0032526 IDA response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369442 GDAP2-002 protein_coding Homo_sapiens 0 1799
ENST00000369443 GDAP2-001 protein_coding Homo_sapiens 0 2200
ENST00000464026 GDAP2-006 processed_transcript Homo_sapiens 0 656
ENST00000491626 GDAP2-005 processed_transcript Homo_sapiens 0 623
ENST00000493555 GDAP2-004 processed_transcript Homo_sapiens 0 981
ENST00000494224 GDAP2-003 processed_transcript Homo_sapiens 0 390

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