C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027977 Ndst3 10090 - 3:123526166-123690852 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029602 Ndst3-201 123526169-123672392 protein_coding
  ENSMUST00000124803 Ndst3-005 123528559-123619450 protein_coding
  ENSMUST00000132112 Ndst3-004 123528648-123619501 protein_coding
  ENSMUST00000132896 Ndst3-006 123556836-123576515 processed_transcript
  ENSMUST00000137404 Ndst3-002 123526166-123690852 nonsense_mediated_decay
  ENSMUST00000154668 Ndst3-001 123526168-123690817 protein_coding
  ENSMUST00000172537 Ndst3-003 123552651-123672321 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029602ENSMUST00000124803ENSMUST00000132112ENSMUST00000137404ENSMUST00000154668ENSMUST00000172537
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029602 N/A 0.070±0.02 N/A 0.843±0.00 0.147±0.07 N/A 0.049±0.01 N/A 0.015±0.00 N/A 0.016±0.01 0.050±0.03 0.018±0.01 N/A
ENSMUST00000124803 0.302±0.00 N/A N/A N/A N/A N/A 0.018±0.00 0.108±0.00 N/A N/A N/A N/A 0.006±0.00 1.246±0.21
ENSMUST00000132112 N/A 0.047±0.00 N/A N/A 0.145±0.00 N/A N/A N/A N/A 0.132±0.00 N/A 0.186±0.13 N/A 2.342±1.32
ENSMUST00000137404 0.218±0.18 N/A 0.084±0.03 3.039±0.09 0.254±0.00 0.106±0.06 0.013±0.00 0.102±0.03 0.023±0.01 N/A N/A 0.337±0.00 0.038±0.03 N/A
ENSMUST00000154668 0.238±0.26 N/A 0.076±0.01 1.313±0.31 0.253±0.03 0.166±0.05 0.027±0.01 0.162±0.05 0.023±0.00 0.035±0.02 N/A 0.125±0.06 0.022±0.02 N/A
ENSMUST00000172537 0.031±0.00 N/A N/A N/A 0.263±0.09 0.142±0.06 N/A 0.062±0.00 0.072±0.03 0.059±0.00 0.019±0.01 0.127±0.06 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003I1 CIL_0003I1_0002 CGP 3:123446913-123690852

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0008146 IDA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0015016 IEA [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0019213 IDA deacetylase activity
GO:0030210 IEA heparin biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041776 ndst3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 protein_coding Danio_rerio
ENSG00000164100 NDST3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 protein_coding Homo_sapiens

Loading