C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132112 Ndst3-004 ENSMUSG00000027977 10090 - 3:123528648-123619501 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungOvaryTestisENSMUST00000132112
Transcript ID Adrenal Breast Lung Ovary Testis
ENSMUST00000132112 0.047±0.00 0.145±0.00 0.132±0.00 0.186±0.13 2.342±1.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003I1 CIL_0003I1_0002 CGP 3:123446913-123690852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008146 IDA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0015016 IEA [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0019213 IDA deacetylase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264363 NDST4-001 protein_coding Homo_sapiens 0 952
ENST00000296499 NDST3-001 protein_coding Homo_sapiens 0 1829
ENST00000504854 NDST4-003 nonsense_mediated_decay Homo_sapiens 0 638
ENST00000514570 NDST4-002 retained_intron Homo_sapiens 0 206
ENST00000613194 NDST4-201 protein_coding Homo_sapiens 0 638

Loading