C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154668 Ndst3-001 ENSMUSG00000027977 10090 - 3:123526168-123690817 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000154668
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000154668 0.238±0.26 0.076±0.01 1.313±0.31 0.253±0.03 0.166±0.05 0.027±0.01 0.162±0.05 0.023±0.00 0.035±0.02 0.125±0.06 0.022±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003I1 CIL_0003I1_0002 CGP 3:123446913-123690852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008146 IDA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0015016 IEA [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0019213 IDA deacetylase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264363 NDST4-001 protein_coding Homo_sapiens 0 1509
ENST00000296499 NDST3-001 protein_coding Homo_sapiens 0 3321
ENST00000394488 NDST3-003 retained_intron Homo_sapiens 0 1149
ENST00000504854 NDST4-003 nonsense_mediated_decay Homo_sapiens 0 806
ENST00000514570 NDST4-002 retained_intron Homo_sapiens 0 254
ENST00000613194 NDST4-201 protein_coding Homo_sapiens 0 1194

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