C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: far upstream element (FUSE) binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028034 Fubp1 10090 + 3:152210458-152236830 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000106121 Fubp1-201 152210521-152236826 protein_coding
  ENSMUST00000166984 Fubp1-202 152210458-152236830 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106121ENSMUST00000166984
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106121 4.749±2.87 15.395±11.72 N/A 13.109±6.03 2.137±0.00 5.665±1.34 N/A 3.154±1.49 5.263±3.05 N/A 0.982±0.40 11.290±7.37 5.166±1.93 6.007±1.71
ENSMUST00000166984 3.318±1.87 9.402±1.46 16.059±3.96 28.200±17.84 7.518±3.68 5.394±2.03 2.206±0.20 2.950±1.35 9.983±8.20 6.404±1.26 2.499±0.57 8.377±3.27 7.476±4.05 3.117±1.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0002 VISTA 3:152003123-152605850

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001205 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0010628 IEA positive regulation of gene expression
GO:0044822 IEA poly(A) RNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029248 fubp1 far upstream element (FUSE) binding protein 1 protein_coding Danio_rerio
ENSG00000162613 FUBP1 far upstream element (FUSE) binding protein 1 protein_coding Homo_sapiens

Loading