C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: far upstream element (FUSE) binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106121 Fubp1-201 ENSMUSG00000028034 10090 + 3:152210521-152236826 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000106121
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000106121 4.749±2.87 15.395±11.72 13.109±6.03 2.137±0.00 5.665±1.34 3.154±1.49 5.263±3.05 0.982±0.40 11.290±7.37 5.166±1.93 6.007±1.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0002 VISTA 3:152003123-152605850

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001205 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0005515 IPI protein binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294623 FUBP1-001 nonsense_mediated_decay Homo_sapiens 0 2542
ENST00000370767 FUBP1-003 protein_coding Homo_sapiens 0 2532
ENST00000370768 FUBP1-002 protein_coding Homo_sapiens 0 3118
ENST00000421641 FUBP1-004 protein_coding Homo_sapiens 0 579
ENST00000470287 FUBP1-013 processed_transcript Homo_sapiens 0 549
ENST00000474632 FUBP1-006 processed_transcript Homo_sapiens 0 619
ENST00000480673 FUBP1-009 processed_transcript Homo_sapiens 0 289
ENST00000483894 FUBP1-010 processed_transcript Homo_sapiens 0 545
ENST00000488814 FUBP1-005 processed_transcript Homo_sapiens 0 619
ENST00000489495 FUBP1-011 processed_transcript Homo_sapiens 0 1526
ENST00000492405 FUBP1-007 processed_transcript Homo_sapiens 0 619
ENST00000492724 FUBP1-008 processed_transcript Homo_sapiens 0 544

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