C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: far upstream element (FUSE) binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166984 Fubp1-202 ENSMUSG00000028034 10090 + 3:152210458-152236830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166984
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166984 3.318±1.87 9.402±1.46 16.059±3.96 28.200±17.84 7.518±3.68 5.394±2.03 2.206±0.20 2.950±1.35 9.983±8.20 6.404±1.26 2.499±0.57 8.377±3.27 7.476±4.05 3.117±1.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0002 VISTA 3:152003123-152605850

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001205 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0010628 IEA positive regulation of gene expression
GO:0044822 IEA poly(A) RNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294623 FUBP1-001 nonsense_mediated_decay Homo_sapiens 0 2542
ENST00000370767 FUBP1-003 protein_coding Homo_sapiens 0 2532
ENST00000370768 FUBP1-002 protein_coding Homo_sapiens 0 3118
ENST00000421641 FUBP1-004 protein_coding Homo_sapiens 0 579
ENST00000470287 FUBP1-013 processed_transcript Homo_sapiens 0 549
ENST00000474632 FUBP1-006 processed_transcript Homo_sapiens 0 414
ENST00000480673 FUBP1-009 processed_transcript Homo_sapiens 0 291
ENST00000483894 FUBP1-010 processed_transcript Homo_sapiens 0 512
ENST00000488814 FUBP1-005 processed_transcript Homo_sapiens 0 289
ENST00000489495 FUBP1-011 processed_transcript Homo_sapiens 0 1526
ENST00000492405 FUBP1-007 processed_transcript Homo_sapiens 0 289
ENST00000492724 FUBP1-008 processed_transcript Homo_sapiens 0 289

Loading