C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028252 Ccnc 10090 + 4:21727701-21759922 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065928 Ccnc-001 21727701-21750546 protein_coding
  ENSMUST00000102997 Ccnc-004 21727726-21750546 protein_coding
  ENSMUST00000108240 Ccnc-005 21727755-21747962 protein_coding
  ENSMUST00000120679 Ccnc-008 21727726-21759922 protein_coding
  ENSMUST00000123294 Ccnc-007 21727753-21747962 processed_transcript
  ENSMUST00000133597 Ccnc-002 21727741-21738524 processed_transcript
  ENSMUST00000133712 Ccnc-006 21727767-21748554 processed_transcript
  ENSMUST00000145288 Ccnc-003 21727758-21732583 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065928ENSMUST00000102997ENSMUST00000108240ENSMUST00000120679ENSMUST00000133712
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065928 N/A N/A N/A N/A 0.862±0.00 2.167±0.00 1.182±0.00 1.511±0.10 3.250±0.20 1.825±0.00 N/A 3.632±0.68 N/A 1.944±0.00
ENSMUST00000102997 1.974±0.16 3.967±0.00 3.866±0.62 4.199±0.58 2.128±0.53 2.465±0.00 1.376±0.00 2.840±0.29 4.585±1.00 3.072±0.69 1.181±0.00 3.737±1.89 2.765±0.84 N/A
ENSMUST00000108240 4.864±0.99 N/A N/A 7.159±0.94 N/A N/A 3.560±0.00 N/A N/A N/A 3.787±0.00 3.957±0.00 6.358±1.85 4.139±1.99
ENSMUST00000120679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.620±0.00 N/A N/A
ENSMUST00000133712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.345±0.00 8.699±3.96 4.581±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016591 IEA DNA-directed RNA polymerase II, holoenzyme
GO:0016592 IDA mediator complex
GO:0019901 IEA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009607 ccnc cyclin C protein_coding Danio_rerio
ENSG00000112237 CCNC cyclin C protein_coding Homo_sapiens

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