C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102997 Ccnc-004 ENSMUSG00000028252 10090 + 4:21727726-21750546 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000102997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000102997 1.974±0.16 3.967±0.00 3.866±0.62 4.199±0.58 2.128±0.53 2.465±0.00 1.376±0.00 2.840±0.29 4.585±1.00 3.072±0.69 1.181±0.00 3.737±1.89 2.765±0.84

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016591 IEA DNA-directed RNA polymerase II, holoenzyme
GO:0016592 IDA mediator complex
GO:0019901 IEA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326298 CCNC-010 nonsense_mediated_decay Homo_sapiens 0 976
ENST00000369217 CCNC-004 protein_coding Homo_sapiens 0 616
ENST00000369220 CCNC-011 protein_coding Homo_sapiens 0 1531
ENST00000482541 CCNC-005 protein_coding Homo_sapiens 0 612
ENST00000484049 CCNC-006 nonsense_mediated_decay Homo_sapiens 0 1251
ENST00000486428 CCNC-002 protein_coding Homo_sapiens 0 952
ENST00000518714 CCNC-003 protein_coding Homo_sapiens 0 1277
ENST00000519617 CCNC-018 retained_intron Homo_sapiens 0 241
ENST00000520371 CCNC-007 protein_coding Homo_sapiens 0 1277
ENST00000520429 CCNC-001 protein_coding Homo_sapiens 0 1550
ENST00000521017 CCNC-016 processed_transcript Homo_sapiens 0 743
ENST00000523310 CCNC-015 retained_intron Homo_sapiens 0 329
ENST00000523541 CCNC-014 retained_intron Homo_sapiens 0 283
ENST00000523639 CCNC-017 retained_intron Homo_sapiens 0 743
ENST00000523799 CCNC-013 protein_coding Homo_sapiens 0 1369
ENST00000523961 CCNC-009 nonsense_mediated_decay Homo_sapiens 0 1134
ENST00000523985 CCNC-008 protein_coding Homo_sapiens 0 1173
ENST00000524049 CCNC-012 protein_coding Homo_sapiens 0 1061

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