C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108240 Ccnc-005 ENSMUSG00000028252 10090 + 4:21727755-21747962 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartMuscleOvaryPlacentaTestisENSMUST00000108240
Transcript ID Adipose Brain Heart Muscle Ovary Placenta Testis
ENSMUST00000108240 4.864±0.99 7.159±0.94 3.560±0.00 3.787±0.00 3.957±0.00 6.358±1.85 4.139±1.99

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016591 IEA DNA-directed RNA polymerase II, holoenzyme
GO:0016592 IDA mediator complex
GO:0019901 IEA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326298 CCNC-010 nonsense_mediated_decay Homo_sapiens 0 976
ENST00000369217 CCNC-004 protein_coding Homo_sapiens 0 616
ENST00000369220 CCNC-011 protein_coding Homo_sapiens 0 1258
ENST00000482541 CCNC-005 protein_coding Homo_sapiens 0 612
ENST00000484049 CCNC-006 nonsense_mediated_decay Homo_sapiens 0 1629
ENST00000486428 CCNC-002 protein_coding Homo_sapiens 0 1050
ENST00000518714 CCNC-003 protein_coding Homo_sapiens 0 1655
ENST00000519617 CCNC-018 retained_intron Homo_sapiens 0 241
ENST00000520371 CCNC-007 protein_coding Homo_sapiens 0 1402
ENST00000520429 CCNC-001 protein_coding Homo_sapiens 0 1277
ENST00000521017 CCNC-016 processed_transcript Homo_sapiens 0 743
ENST00000523310 CCNC-015 retained_intron Homo_sapiens 0 329
ENST00000523541 CCNC-014 retained_intron Homo_sapiens 0 283
ENST00000523639 CCNC-017 retained_intron Homo_sapiens 0 743
ENST00000523799 CCNC-013 protein_coding Homo_sapiens 0 1155
ENST00000523961 CCNC-009 nonsense_mediated_decay Homo_sapiens 0 861
ENST00000523985 CCNC-008 protein_coding Homo_sapiens 0 994
ENST00000524049 CCNC-012 protein_coding Homo_sapiens 0 1061

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