C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030140 Ikbkap-001 ENSMUSG00000028431 10090 - 4:56749680-56802331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030140
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030140 2.724±2.22 2.199±0.64 0.835±0.00 5.836±2.31 1.712±0.66 1.480±0.40 1.427±0.35 1.333±0.19 1.151±0.21 2.147±0.86 2.192±0.75 4.526±1.20 6.873±5.96 1.869±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GJ CIL_0001GJ_0002 CGP 4:56743413-56802331
CIL_0001GI CIL_0001GI_0002 CGP 4:56749680-56809601

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005730 IEA nucleolus
GO:0005737 ISS cytoplasm
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0006368 IEA transcription elongation from RNA polymerase II promoter
GO:0008023 ISS transcription elongation factor complex
GO:0008607 ISS phosphorylase kinase regulator activity
GO:0016591 IEA DNA-directed RNA polymerase II, holoenzyme
GO:0030335 IMP positive regulation of cell migration
GO:0033588 ISS Elongator holoenzyme complex
GO:0045859 IEA regulation of protein kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374647 IKBKAP-001 protein_coding Homo_sapiens 0 3711
ENST00000537196 IKBKAP-201 protein_coding Homo_sapiens 0 2896

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