C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fanconi anemia, complementation group G
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030165 Fancg-001 ENSMUSG00000028453 10090 - 4:43002343-43010355 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030165
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030165 2.724±0.75 1.692±0.66 2.776±0.50 3.457±2.58 2.771±0.49 2.931±0.77 0.708±0.37 1.706±0.20 2.403±2.02 2.250±0.30 0.394±0.08 1.837±0.82 3.210±1.09 14.948±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SF CIL_0005SF_0002 CGP 4:42979963-43010506
CIL_0005SE CIL_0005SE_0002 CGP 4:43002343-43025819

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001541 IMP ovarian follicle development
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006281 IEA DNA repair
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007005 IEA mitochondrion organization
GO:0007286 IMP spermatid development
GO:0009314 IMP response to radiation
GO:0043240 ISS Fanconi anaemia nuclear complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378643 FANCG-001 protein_coding Homo_sapiens 0 1288
ENST00000425676 FANCG-005 nonsense_mediated_decay Homo_sapiens 0 1018

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