C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BEN domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028545 Bend5 10090 + 4:111415006-111460298 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030274 Bend5-001 111415006-111460298 protein_coding
  ENSMUST00000123667 Bend5-005 111433319-111459927 processed_transcript
  ENSMUST00000129760 Bend5-002 111415088-111459920 processed_transcript
  ENSMUST00000130523 Bend5-004 111415047-111433246 processed_transcript
  ENSMUST00000138394 Bend5-006 111415207-111420538 processed_transcript
  ENSMUST00000139876 Bend5-003 111433197-111460296 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030274ENSMUST00000123667ENSMUST00000129760ENSMUST00000130523ENSMUST00000139876
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030274 0.742±0.62 5.501±0.81 2.708±0.09 6.801±3.36 2.045±1.56 1.039±0.13 0.614±0.28 5.038±0.59 0.110±0.06 0.719±0.28 0.270±0.12 3.797±1.66 7.774±3.05 1.208±0.43
ENSMUST00000123667 N/A N/A N/A N/A 0.318±0.00 N/A N/A N/A N/A N/A N/A 2.368±0.85 N/A N/A
ENSMUST00000129760 0.996±0.86 N/A 4.738±0.47 8.731±4.44 0.708±0.36 1.353±0.85 1.365±0.13 5.249±2.18 0.195±0.08 1.183±0.18 0.260±0.10 2.183±0.89 15.878±9.84 1.432±0.68
ENSMUST00000130523 1.823±0.15 8.974±3.63 N/A N/A 2.885±1.06 1.237±0.45 N/A N/A N/A 1.025±0.49 N/A 2.210±0.00 N/A N/A
ENSMUST00000139876 N/A N/A N/A N/A N/A N/A N/A N/A 0.120±0.00 N/A 0.160±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000632 CIL_000632_0003 CGP 4:110397661-111664324
CIL_0008UZ CIL_0008UZ_0002 VISTA 4:111252851-111853446

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005794 IDA Golgi apparatus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075624 bend5 BEN domain containing 5 protein_coding Danio_rerio
ENSG00000162373 BEND5 BEN domain containing 5 protein_coding Homo_sapiens

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