C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BEN domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030274 Bend5-001 ENSMUSG00000028545 10090 + 4:111415006-111460298 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030274 0.742±0.62 5.501±0.81 2.708±0.09 6.801±3.36 2.045±1.56 1.039±0.13 0.614±0.28 5.038±0.59 0.110±0.06 0.719±0.28 0.270±0.12 3.797±1.66 7.774±3.05 1.208±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000632 CIL_000632_0003 CGP 4:110397661-111664324
CIL_0008UZ CIL_0008UZ_0002 VISTA 4:111252851-111853446

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005794 IDA Golgi apparatus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371833 BEND5-001 protein_coding Homo_sapiens 0 2074
ENST00000463562 BEND5-002 retained_intron Homo_sapiens 0 1397
ENST00000476079 BEND5-004 processed_transcript Homo_sapiens 0 597
ENST00000476096 BEND5-005 processed_transcript Homo_sapiens 0 503
ENST00000480399 BEND5-003 processed_transcript Homo_sapiens 0 442
ENST00000489956 BEND5-006 retained_intron Homo_sapiens 0 405

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