C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: uroporphyrinogen decarboxylase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028684 Urod 10090 - 4:116989965-116994413 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030446 Urod-001 116989965-116994413 protein_coding
  ENSMUST00000123079 Urod-007 116992284-116994346 retained_intron
  ENSMUST00000127635 Urod-005 116992784-116994345 retained_intron
  ENSMUST00000130273 Urod-011 116991461-116994357 protein_coding
  ENSMUST00000134598 Urod-009 116990217-116991665 retained_intron
  ENSMUST00000135164 Urod-006 116991076-116994364 retained_intron
  ENSMUST00000139209 Urod-003 116993108-116994340 retained_intron
  ENSMUST00000139816 Urod-002 116993280-116994380 retained_intron
  ENSMUST00000150370 Urod-008 116990285-116991886 retained_intron
  ENSMUST00000153629 Urod-010 116992953-116993597 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030446ENSMUST00000127635ENSMUST00000130273ENSMUST00000150370
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030446 27.639±5.79 36.839±1.70 7.055±0.79 10.545±1.40 18.605±9.92 11.106±3.38 13.633±5.17 15.416±3.44 71.536±76.79 15.931±5.45 16.940±2.17 25.807±12.12 21.376±9.32 4.615±1.89
ENSMUST00000127635 N/A N/A N/A 38.614±0.00 16.763±1.24 11.486±0.00 N/A N/A 24.467±0.00 N/A 12.645±2.64 37.684±6.22 31.004±5.32 3.044±0.00
ENSMUST00000130273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.364±0.00 31.833±0.00 7.525±0.00
ENSMUST00000150370 N/A N/A N/A 54.811±0.00 N/A N/A 16.559±0.00 N/A N/A N/A N/A 75.026±0.00 47.937±17.81 10.362±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PR CIL_0001PR_0002 CGP 4:116877376-116994413

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004853 IMP uroporphyrinogen decarboxylase activity
GO:0005829 IDA cytosol
GO:0006782 IEA protoporphyrinogen IX biosynthetic process
GO:0006783 IMP heme biosynthetic process
GO:0042168 IMP heme metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006818 urod uroporphyrinogen decarboxylase protein_coding Danio_rerio
ENSG00000126088 UROD uroporphyrinogen decarboxylase protein_coding Homo_sapiens

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