C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uroporphyrinogen decarboxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030446 Urod-001 ENSMUSG00000028684 10090 - 4:116989965-116994413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030446
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030446 27.639±5.79 36.839±1.70 7.055±0.79 10.545±1.40 18.605±9.92 11.106±3.38 13.633±5.17 15.416±3.44 71.536±76.79 15.931±5.45 16.940±2.17 25.807±12.12 21.376±9.32 4.615±1.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PR CIL_0001PR_0002 CGP 4:116877376-116994413

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004853 IMP uroporphyrinogen decarboxylase activity
GO:0005829 IDA cytosol
GO:0006782 IEA protoporphyrinogen IX biosynthetic process
GO:0006783 IMP heme biosynthetic process
GO:0042168 IMP heme metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246337 UROD-001 protein_coding Homo_sapiens 0 1395
ENST00000428106 UROD-003 protein_coding Homo_sapiens 0 588
ENST00000434478 UROD-004 protein_coding Homo_sapiens 0 440
ENST00000460334 UROD-007 processed_transcript Homo_sapiens 0 688
ENST00000460906 UROD-012 processed_transcript Homo_sapiens 0 510
ENST00000461035 UROD-005 processed_transcript Homo_sapiens 0 337
ENST00000462688 UROD-011 processed_transcript Homo_sapiens 0 688
ENST00000463092 UROD-006 processed_transcript Homo_sapiens 0 278
ENST00000469548 UROD-008 processed_transcript Homo_sapiens 0 1042
ENST00000472254 UROD-017 processed_transcript Homo_sapiens 0 623
ENST00000473012 UROD-014 processed_transcript Homo_sapiens 0 374
ENST00000478467 UROD-015 processed_transcript Homo_sapiens 0 802
ENST00000486699 UROD-009 processed_transcript Homo_sapiens 0 953
ENST00000490385 UROD-010 processed_transcript Homo_sapiens 0 512
ENST00000491300 UROD-020 processed_transcript Homo_sapiens 0 828
ENST00000491773 UROD-016 processed_transcript Homo_sapiens 0 640
ENST00000494399 UROD-002 processed_transcript Homo_sapiens 0 512
ENST00000496439 UROD-013 processed_transcript Homo_sapiens 0 588

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