C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uroporphyrinogen decarboxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127635 Urod-005 ENSMUSG00000028684 10090 - 4:116992784-116994345 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000127635
Transcript ID Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000127635 38.614±0.00 16.763±1.24 11.486±0.00 24.467±0.00 12.645±2.64 37.684±6.22 31.004±5.32 3.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PR CIL_0001PR_0002 CGP 4:116877376-116994413

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246337 UROD-001 protein_coding Homo_sapiens 0 597
ENST00000428106 UROD-003 protein_coding Homo_sapiens 0 588
ENST00000434478 UROD-004 protein_coding Homo_sapiens 0 270
ENST00000460334 UROD-007 processed_transcript Homo_sapiens 0 508
ENST00000460906 UROD-012 processed_transcript Homo_sapiens 0 518
ENST00000461035 UROD-005 processed_transcript Homo_sapiens 0 337
ENST00000462688 UROD-011 processed_transcript Homo_sapiens 0 342
ENST00000463092 UROD-006 processed_transcript Homo_sapiens 0 268
ENST00000469548 UROD-008 processed_transcript Homo_sapiens 0 588
ENST00000473012 UROD-014 processed_transcript Homo_sapiens 0 261
ENST00000478467 UROD-015 processed_transcript Homo_sapiens 0 337
ENST00000486699 UROD-009 processed_transcript Homo_sapiens 0 499
ENST00000490385 UROD-010 processed_transcript Homo_sapiens 0 342
ENST00000491300 UROD-020 processed_transcript Homo_sapiens 0 499
ENST00000491773 UROD-016 processed_transcript Homo_sapiens 0 588
ENST00000494399 UROD-002 processed_transcript Homo_sapiens 0 342
ENST00000496439 UROD-013 processed_transcript Homo_sapiens 0 595

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