C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hippocalcin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028785 Hpca 10090 - 4:129111570-129122036 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030572 Hpca-201 129111576-129121291 protein_coding
  ENSMUST00000095807 Hpca-002 129111570-129118967 protein_coding
  ENSMUST00000116442 Hpca-005 129112260-129120946 protein_coding
  ENSMUST00000116444 Hpca-001 129111570-129122036 protein_coding
  ENSMUST00000125931 Hpca-006 129112449-129121925 protein_coding
  ENSMUST00000135763 Hpca-004 129118605-129121708 protein_coding
  ENSMUST00000139450 Hpca-007 129112274-129121889 protein_coding
  ENSMUST00000149763 Hpca-003 129112675-129121739 protein_coding
  ENSMUST00000164649 Hpca-202 129111576-129121740 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000030572ENSMUST00000095807ENSMUST00000116442ENSMUST00000116444ENSMUST00000125931ENSMUST00000149763
Transcript ID Adipose Adrenal Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000030572 0.174±0.00 0.342±0.07 17.238±2.58 N/A 0.096±0.08 0.053±0.02 0.069±0.00 0.736±0.53 2.937±0.67 0.392±0.00
ENSMUST00000095807 0.175±0.05 0.412±0.20 N/A 0.588±0.00 N/A 0.596±0.35 0.054±0.01 0.869±0.28 1.631±0.00 1.310±0.55
ENSMUST00000116442 0.231±0.00 0.338±0.00 3.340±0.54 1.231±0.33 0.049±0.02 0.291±0.29 N/A 0.876±0.53 1.336±0.00 2.237±0.04
ENSMUST00000116444 0.089±0.00 0.298±0.00 N/A 0.620±0.00 0.083±0.00 0.269±0.22 N/A 0.465±0.06 N/A 0.782±0.00
ENSMUST00000125931 N/A 0.400±0.04 563.913±0.00 N/A 0.062±0.00 N/A 0.109±0.00 N/A 6.452±3.00 0.758±0.00
ENSMUST00000149763 N/A N/A N/A N/A N/A 0.066±0.01 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0048839 IDA inner ear development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000121905 HPCA hippocalcin protein_coding Homo_sapiens

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