C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hippocalcin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139450 Hpca-007 ENSMUSG00000028785 10090 - 4:129112274-129121889 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0048839 IDA inner ear development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000004034 hpca-001 protein_coding Danio_rerio 0 558
ENST00000307845 HPCAL1-001 protein_coding Homo_sapiens 0 697
ENST00000372844 HPCAL4-001 protein_coding Homo_sapiens 0 281
ENST00000373467 HPCA-001 protein_coding Homo_sapiens 0 998
ENST00000381765 HPCAL1-002 protein_coding Homo_sapiens 0 697
ENST00000419810 HPCAL1-003 nonsense_mediated_decay Homo_sapiens 0 608
ENST00000459874 HPCA-004 processed_transcript Homo_sapiens 0 392
ENST00000470166 HPCA-003 processed_transcript Homo_sapiens 0 396
ENST00000470896 HPCA-002 processed_transcript Homo_sapiens 5.00264e-43 178
ENST00000480118 HPCA-005 processed_transcript Homo_sapiens 0 782
ENST00000612703 HPCAL4-201 protein_coding Homo_sapiens 2e-25 122
ENST00000613496 HPCAL1-201 protein_coding Homo_sapiens 0 697
ENST00000617690 HPCAL4-202 protein_coding Homo_sapiens 0 281
ENST00000620771 HPCAL1-202 protein_coding Homo_sapiens 0 697
ENST00000622018 HPCAL1-203 protein_coding Homo_sapiens 0 697

Loading