C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hippocalcin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149763 Hpca-003 ENSMUSG00000028785 10090 - 4:129112675-129121739 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000149763
Transcript ID Liver
ENSMUST00000149763 0.066±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0048839 IDA inner ear development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000004034 hpca-001 protein_coding Danio_rerio 0 477
ENST00000307845 HPCAL1-001 protein_coding Homo_sapiens 0 606
ENST00000372844 HPCAL4-001 protein_coding Homo_sapiens 0 281
ENST00000373467 HPCA-001 protein_coding Homo_sapiens 0 780
ENST00000381765 HPCAL1-002 protein_coding Homo_sapiens 0 606
ENST00000419810 HPCAL1-003 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000459874 HPCA-004 processed_transcript Homo_sapiens 1.99965e-42 176
ENST00000470166 HPCA-003 processed_transcript Homo_sapiens 9.94922e-44 180
ENST00000470896 HPCA-002 processed_transcript Homo_sapiens 6.00036e-42 174
ENST00000480118 HPCA-005 processed_transcript Homo_sapiens 0 797
ENST00000612703 HPCAL4-201 protein_coding Homo_sapiens 2e-25 122
ENST00000613496 HPCAL1-201 protein_coding Homo_sapiens 0 606
ENST00000617690 HPCAL4-202 protein_coding Homo_sapiens 0 281
ENST00000620771 HPCAL1-202 protein_coding Homo_sapiens 0 606
ENST00000622018 HPCAL1-203 protein_coding Homo_sapiens 0 606

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