C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: erythrocyte protein band 4.1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084253 Epb4.1-202 ENSMUSG00000028906 10090 - 4:131923429-132049078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLungOvaryTestisENSMUST00000084253
Transcript ID Adrenal Brain Lung Ovary Testis
ENSMUST00000084253 2.273±0.00 11.929±1.66 5.346±2.11 3.527±1.33 0.696±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0002 VISTA 4:131775516-132379227

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005198 IEA structural molecule activity
GO:0005516 IEA calmodulin binding
GO:0005634 IEA nucleus
GO:0008360 ISS regulation of cell shape
GO:0015629 ISS actin cytoskeleton
GO:0016020 IDA membrane
GO:0019898 IEA extrinsic component of membrane
GO:0030036 ISS actin cytoskeleton organization
GO:0030507 ISS spectrin binding
GO:0030863 IDA cortical cytoskeleton
GO:0030866 IEA cortical actin cytoskeleton organization
GO:0032092 IGI positive regulation of protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000136067 si:ch73-18b11.1-001 protein_coding Danio_rerio 0.00000000000003 86
ENST00000343067 EPB41-201 protein_coding Homo_sapiens 0 2006
ENST00000347529 EPB41-005 protein_coding Homo_sapiens 0 2065
ENST00000349460 EPB41-004 protein_coding Homo_sapiens 0 1491
ENST00000356093 EPB41-202 protein_coding Homo_sapiens 0 2006
ENST00000373797 EPB41-002 protein_coding Homo_sapiens 0 2148
ENST00000373798 EPB41-001 protein_coding Homo_sapiens 0 2006
ENST00000373800 EPB41-003 protein_coding Homo_sapiens 0 1491
ENST00000420504 TMEM200B-002 protein_coding Homo_sapiens 0 209
ENST00000460378 EPB41-006 processed_transcript Homo_sapiens 0 656
ENST00000462032 EPB41-009 processed_transcript Homo_sapiens 0 294
ENST00000482464 EPB41-007 processed_transcript Homo_sapiens 0 573
ENST00000490308 EPB41-008 processed_transcript Homo_sapiens 0 435
ENST00000521452 TMEM200B-001 protein_coding Homo_sapiens 0 209

Loading