C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: erythrocyte protein band 4.1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137846 Epb4.1-010 ENSMUSG00000028906 10090 - 4:131923413-132003794 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000137846
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000137846 4.880±1.28 6.358±1.21 4.563±0.00 5.262±0.00 7.278±1.55 7.535±0.81 10.840±3.40 11.138±1.89 21.631±16.57 8.291±2.25 5.243±0.56 2.761±0.88 6.857±1.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0002 VISTA 4:131775516-132379227

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005198 IEA structural molecule activity
GO:0008360 ISS regulation of cell shape
GO:0015629 ISS actin cytoskeleton
GO:0016020 IDA membrane
GO:0019898 IEA extrinsic component of membrane
GO:0030036 ISS actin cytoskeleton organization
GO:0030507 ISS spectrin binding
GO:0030863 IDA cortical cytoskeleton
GO:0030866 IEA cortical actin cytoskeleton organization
GO:0032092 IGI positive regulation of protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000136067 si:ch73-18b11.1-001 protein_coding Danio_rerio 0.00000000000003 86
ENST00000337057 EPB41L2-001 protein_coding Homo_sapiens 0.0000000002 73
ENST00000343067 EPB41-201 protein_coding Homo_sapiens 0 1491
ENST00000347529 EPB41-005 protein_coding Homo_sapiens 0 1221
ENST00000349460 EPB41-004 protein_coding Homo_sapiens 0 1491
ENST00000356093 EPB41-202 protein_coding Homo_sapiens 0 2462
ENST00000368128 EPB41L2-010 protein_coding Homo_sapiens 0.0000000002 73
ENST00000373797 EPB41-002 protein_coding Homo_sapiens 0 1491
ENST00000373798 EPB41-001 protein_coding Homo_sapiens 0 1491
ENST00000373800 EPB41-003 protein_coding Homo_sapiens 0 2013
ENST00000420504 TMEM200B-002 protein_coding Homo_sapiens 0 209
ENST00000456097 EPB41L2-003 protein_coding Homo_sapiens 0.00000000006 73
ENST00000460378 EPB41-006 processed_transcript Homo_sapiens 0 656
ENST00000462032 EPB41-009 processed_transcript Homo_sapiens 0 294
ENST00000490308 EPB41-008 processed_transcript Homo_sapiens 0 435
ENST00000521452 TMEM200B-001 protein_coding Homo_sapiens 0 209
ENST00000527423 EPB41L2-027 protein_coding Homo_sapiens 0.00000000005 73
ENST00000530757 EPB41L2-015 protein_coding Homo_sapiens 0.0000000002 73

Loading